Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028715.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.1e-80 303.1 147 100.0
MELO3C000960.2 Cucumis melo HOM05D003336 ORTHO05D003807 2.5e-80 302.0 147 99.3
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 4.3e-80 301.2 147 99.3
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 4.3e-80 301.2 147 99.3
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 3.4e-77 291.6 147 94.6
vmacro00616 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 1.7e-76 289.3 147 93.2
vmacro00649 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 1.7e-76 289.3 147 93.2
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 1.9e-75 285.8 147 92.5
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.2e-75 285.0 147 92.5
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 3.2e-75 285.0 147 91.2
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 4.2e-75 284.6 147 91.8
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 5.5e-75 284.3 147 90.5
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 7.1e-75 283.9 147 91.8
CSS0038429 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 9.3e-75 283.5 147 91.8
MBI01_g10303_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 9.3e-75 283.5 144 94.4
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 9.3e-75 283.5 147 91.8
Dinv22743 Davidia involucrata HOM05D003336 ORTHO05D003807 1.2e-74 283.1 147 91.8
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 1.6e-74 282.7 146 91.8
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 2.1e-74 282.3 147 90.5
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 2.7e-74 282.0 147 91.2
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 3.5e-74 281.6 147 89.1
CSS0035259 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.6e-74 281.2 147 91.2
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 4.6e-74 281.2 147 89.1
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 6.0e-74 280.8 147 88.4
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 6.0e-74 280.8 147 90.5
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 6.0e-74 280.8 147 90.5
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 6.0e-74 280.8 147 89.8
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 6.0e-74 280.8 147 90.5
Ca_10458_v3 Cicer arietinum L. HOM05D003336 ORTHO05D003807 7.9e-74 280.4 147 89.8
Haze_21691 Corylus avellana HOM05D003336 ORTHO05D003807 7.9e-74 280.4 147 90.5
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 1.0e-73 280.0 147 89.8
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 1.0e-73 280.0 147 89.8
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 1.0e-73 280.0 147 87.8
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 1.3e-73 279.6 146 89.0
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.8e-73 279.3 144 91.7
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 2.3e-73 278.9 146 88.4
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 2.3e-73 278.9 146 88.4
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 2.3e-73 278.9 146 89.0
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 2.3e-73 278.9 147 89.8
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 2.3e-73 278.9 147 89.8
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 3.0e-73 278.5 147 88.4
Lj6C18T11 Lonicera japonica HOM05D003336 ORTHO05D003807 3.0e-73 278.5 147 90.5
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 3.0e-73 278.5 147 89.1
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 3.9e-73 278.1 147 90.5
Cfa013247 Carpinus fangiana HOM05D003336 ORTHO05D003807 3.9e-73 278.1 147 89.8
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 5.1e-73 277.7 147 87.1
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 5.1e-73 277.7 147 89.8
Aqoxy1G02652 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 8.7e-73 276.9 144 90.3
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 8.7e-73 276.9 146 90.4
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.1e-72 276.6 147 88.4
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 1.5e-72 276.2 147 87.1
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 1.9e-72 275.8 147 87.1
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.9e-72 275.8 145 90.3
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 2.5e-72 275.4 146 88.4
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 2.5e-72 275.4 146 88.4
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 2.5e-72 275.4 147 89.8
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 2.5e-72 275.4 147 87.8
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 2.5e-72 275.4 147 89.1
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 3.3e-72 275.0 147 87.1
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.3e-72 275.0 146 90.4
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.3e-72 275.0 146 90.4
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 3.3e-72 275.0 147 88.4
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 3.3e-72 275.0 146 88.4
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 3.3e-72 275.0 144 91.0
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 4.3e-72 274.6 147 87.1
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 4.3e-72 274.6 147 86.4
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 4.3e-72 274.6 147 87.1
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 4.3e-72 274.6 147 86.4
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 4.3e-72 274.6 146 87.0
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 4.3e-72 274.6 147 89.1
Nitab4.5_0005460g0060 Nicotiana tabacum HOM05D003336 ORTHO05D003807 4.3e-72 274.6 146 88.4
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 5.6e-72 274.2 146 89.7
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 5.6e-72 274.2 146 88.4
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 7.4e-72 273.9 147 89.1
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 7.4e-72 273.9 147 89.1
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 7.4e-72 273.9 146 87.7
Nitab4.5_0000233g0220 Nicotiana tabacum HOM05D003336 ORTHO05D003807 9.6e-72 273.5 146 87.7
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 1.3e-71 273.1 147 86.4
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 1.3e-71 273.1 147 87.8
Actinidia35985 Actinidia chinensis HOM05D003336 ORTHO05D003807 1.6e-71 272.7 147 87.8
Actinidia35987 Actinidia chinensis HOM05D003336 ORTHO05D003807 1.6e-71 272.7 147 87.8
BcaB07g33710 Brassica carinata HOM05D003336 ORTHO05D003807 2.1e-71 272.3 147 85.0
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 2.8e-71 271.9 146 87.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 2.8e-71 271.9 146 89.0
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.8e-71 271.9 146 88.4
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 2.8e-71 271.9 147 85.7
Cc04_g08960 Coffea canephora HOM05D003336 ORTHO05D003807 3.7e-71 271.6 146 87.7
Peaxi162Scf00108g01317 Petunia axillaris HOM05D003336 ORTHO05D003807 3.7e-71 271.6 146 88.4
Sp7g20730 Schrenkiella parvula HOM05D003336 ORTHO05D003807 3.7e-71 271.6 147 85.0
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 8.2e-71 270.4 146 87.7
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.1e-70 270.0 145 89.0
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.4e-70 269.6 147 87.8
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 1.8e-70 269.2 146 88.4
GSVIVG01010779001 Vitis vinifera HOM05D003336 ORTHO05D003807 2.4e-70 268.9 147 86.4
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 3.1e-70 268.5 146 87.7
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.0e-70 268.1 147 87.1
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 9.0e-70 266.9 146 87.0
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.5e-69 266.2 147 85.0
SalBow1G0055 Salvia bowleyana HOM05D003336 ORTHO05D003807 2.0e-69 265.8 146 84.9
SalBow1G1314 Salvia bowleyana HOM05D003336 ORTHO05D003807 2.0e-69 265.8 146 84.9
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 1.3e-68 263.1 146 84.9
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.7e-68 262.7 146 85.6
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 2.2e-68 262.3 144 86.8
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 2.9e-68 261.9 146 84.9
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.1e-67 260.0 141 86.5
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 7.1e-67 257.3 145 85.5
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.7e-66 255.4 139 86.3
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 3.5e-66 255.0 144 81.2
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.3e-65 253.1 144 84.0
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-65 252.7 147 83.0
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.8e-65 252.7 147 83.0
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 3.3e-64 248.4 144 81.2
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 1.4e-62 243.0 144 77.8
Potri.007G129400 Populus trichocarpa HOM05D003336 ORTHO05D003807 2.0e-61 239.2 136 83.8
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 3.4e-61 238.4 143 76.2
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 3.4e-61 238.4 143 79.7
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 3.4e-61 238.4 143 76.2
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 4.5e-61 238.0 144 78.5
Lj6C12T9 Lonicera japonica HOM05D003336 ORTHO05D003807 1.0e-60 236.9 143 81.8
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 4.3e-56 221.5 147 74.1
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 9.7e-56 220.3 144 70.8
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 2.2e-55 219.2 140 75.7
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.2e-53 213.4 147 72.1
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.6e-53 212.2 147 74.1
Sed0015341 Sechium edule HOM05D003336 ORTHO05D003807 7.7e-53 210.7 147 74.1
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 3.6e-50 201.8 105 89.5
Haze_26283 Corylus avellana HOM05D003336 ORTHO05D003807 3.6e-50 201.8 144 60.4
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 1.1e-48 196.8 144 71.5
CDE02G0747 Ceratophyllum demersum HOM05D003336 ORTHO05D003807 5.3e-46 188.0 144 66.0
Atru.chr6.1069 Acer truncatum HOM05D003336 ORTHO05D003807 2.2e-44 182.6 109 80.7
Lalb_Chr09g0333021 Lupinus albus HOM05D003336 ORTHO05D003807 8.5e-44 180.6 141 65.2
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 1.4e-43 179.9 159 52.2
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.7e-39 165.2 143 62.9
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 1.4e-38 163.3 86 89.5
Prupe.1G196100 Prunus persica HOM05D003336 ORTHO05D003807 2.9e-36 155.6 145 59.3
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 2.1e-34 149.4 109 67.9
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 2.1e-26 122.9 63 93.7
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 2.0e-24 116.3 63 88.9
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.7e-24 114.8 67 82.1
RcHm_v2.0_Chr1g0329841 Rosa chinensis HOM05D003336 ORTHO05D003807 8.3e-23 110.9 59 88.1
BraA08t33567Z Brassica rapa HOM05D003336 ORTHO05D003807 3.1e-22 109.0 68 73.5
CSS0002456 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.6e-21 106.7 135 50.4
Sabra07G0105400 Salix brachista HOM05D003336 ORTHO05D000611 2.9e-20 102.4 136 47.1
CARHR113970 Cardamine hirsuta HOM05D003336 ORTHO05D003807 8.6e-20 100.9 58 84.5
CSS0009752 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.5e-19 98.2 61 73.8
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 7.2e-19 97.8 51 88.2
CSS0004282 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.6e-18 95.5 59 81.4
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 4.0e-17 92.0 49 87.8
AagrBONN_evm.TU.Sc2ySwM_117.2573 Anthoceros agrestis HOM05D001778 ORTHO05D005872 1.5e-16 90.1 56 71.4
SEGI_10539 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.0e-12 77.4 53 67.9
BcaB02g08946 Brassica carinata HOM05D005501 ORTHO05D007485 1.4e-09 67.0 149 31.5
BcaC02g12231 Brassica carinata HOM05D005501 ORTHO05D007485 1.8e-09 66.6 147 29.9
Atru.chr5.287 Acer truncatum HOM05D005501 ORTHO05D007485 3.1e-09 65.9 149 30.9
Eucgr.E01449 Eucalyptus grandis HOM05D005501 ORTHO05D007485 3.1e-09 65.9 149 32.2
PGR042G1853 Punica granatum HOM05D005501 ORTHO05D007485 1.5e-08 63.5 143 32.2
A05p05250 Brassica napus HOM05D005501 ORTHO05D007485 3.4e-08 62.4 148 29.7
C04p06180 Brassica napus HOM05D005501 ORTHO05D007485 3.4e-08 62.4 148 29.7
BolC4t22243H Brassica oleracea HOM05D005501 ORTHO05D007485 3.4e-08 62.4 150 31.3
BraA05t19495Z Brassica rapa HOM05D005501 ORTHO05D007485 3.4e-08 62.4 148 29.7
Prupe.2G143300 Prunus persica HOM05D005501 ORTHO05D007485 3.4e-08 62.4 143 30.1
CSS0005877 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.8e-08 61.6 51 64.7
Phvul.010G081700 Phaseolus vulgaris HOM05D005501 ORTHO05D007485 5.8e-08 61.6 143 30.1
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 9.8e-08 60.8 29 96.6
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 1.3e-07 60.5 29 93.1
Cpa.g.sc18.102 Carica papaya HOM05D005501 ORTHO05D007485 1.7e-07 60.1 150 30.7
AUR62013652 Chenopodium quinoa HOM05D005501 ORTHO05D007485 2.2e-07 59.7 149 30.2
Lalb_Chr07g0189951 Lupinus albus HOM05D005501 ORTHO05D007485 2.2e-07 59.7 143 29.4
AUR62004192 Chenopodium quinoa HOM05D005501 ORTHO05D007485 6.4e-07 58.2 143 28.7
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 8.3e-07 57.8 29 96.6


User provided reference genes

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