Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028519.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.6e-92 342.8 177 100.0
MELO3C027967.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.0e-47 193.0 147 72.8
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.1e-43 178.3 159 64.8
MELO3C030857.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.6e-42 174.9 102 86.3
MELO3C029067.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.5e-39 166.8 132 70.5
MELO3C034371.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.1e-37 157.9 84 95.2
MELO3C033385.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.3e-34 147.9 140 64.3
MELO3C029528.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-33 147.1 123 65.0
Sed0007296 Sechium edule HOM05D000539 ORTHO05D000592 6.2e-33 144.8 120 60.8
MELO3C030143.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.9e-32 141.4 145 60.0
MELO3C028521.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.4e-29 132.9 69 94.2
CsaV3_UNG238520 Cucumis sativus L. HOM05D000539 ORTHO05D000592 3.3e-26 122.5 152 45.4
MELO3C029479.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.0e-24 114.4 63 92.1
MELO3C029690.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.4e-23 112.5 114 58.8
MELO3C000336.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.6e-23 111.3 127 49.6
MELO3C032706.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.2e-22 109.8 87 59.8
MELO3C033921.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.4e-21 107.1 53 98.1
MELO3C033862.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.2e-21 105.5 137 43.8
CsaV3_5G020430 Cucumis sativus L. HOM05D000539 ORTHO05D000592 2.3e-19 99.8 79 63.3
MELO3C030218.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.9e-19 99.0 127 46.5
MELO3C034092.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.7e-19 98.2 96 59.4
MELO3C035111.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.3e-18 95.9 110 48.2
MELO3C032029.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.0e-16 87.8 74 67.6
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 9.0e-16 87.8 63 68.3
Sed0019768 Sechium edule HOM05D000539 ORTHO05D000592 1.2e-15 87.4 63 66.7
Sed0020810 Sechium edule HOM05D000539 ORTHO05D000592 4.5e-15 85.5 63 66.7
Sed0002111 Sechium edule HOM05D000539 ORTHO05D000592 1.7e-14 83.6 57 70.2
Sed0025384 Sechium edule HOM05D007110 ORTHO05D000592 8.4e-14 81.3 72 56.9
MELO3C031515.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.2e-13 79.3 41 92.7
MELO3C035432.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.2e-13 79.3 118 39.8
CsaV3_6G018870 Cucumis sativus L. HOM05D000539 ORTHO05D000592 5.5e-13 78.6 108 40.7
MELO3C000141.2 Cucumis melo HOM05D000539 ORTHO05D000592 9.3e-13 77.8 63 63.5
MELO3C033140.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-12 77.4 115 43.5
CsaV3_6G021340 Cucumis sativus L. HOM05D000539 ORTHO05D000592 3.5e-12 75.9 113 36.3
RcHm_v2.0_Chr5g0071751 Rosa chinensis HOM05D000539 ORTHO05D000592 4.6e-12 75.5 118 38.1
CsaV3_1G045370 Cucumis sativus L. HOM05D000539 ORTHO05D000592 6.1e-12 75.1 57 61.4
MELO3C031516.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.9e-12 74.7 40 97.5
ClCG09G015240 Citrullus lanatus HOM05D000539 ORTHO05D000592 1.0e-11 74.3 51 72.5
MELO3C034305.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-11 73.6 116 38.8
MELO3C034518.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-11 73.6 122 35.2
MELO3C031217.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.9e-11 72.4 46 69.6
CsaV3_3G024980 Cucumis sativus L. HOM05D000539 ORTHO05D000592 6.7e-11 71.6 109 42.2
Sed0002737 Sechium edule HOM05D000539 ORTHO05D000592 6.7e-11 71.6 52 63.5
MELO3C028628.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-10 70.9 63 60.3
MELO3C029907.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.5e-10 70.5 63 55.6
CsaV3_4G020790 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.9e-10 70.1 62 54.8
CsaV3_7G012630 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.9e-10 70.1 62 54.8
CsaV3_UNG030160 Cucumis sativus L. HOM05D000539 ORTHO05D000592 1.9e-10 70.1 62 54.8
Sed0012130 Sechium edule HOM05D000539 ORTHO05D000592 1.9e-10 70.1 45 66.7
MELO3C029153.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.5e-10 69.7 118 33.9
MELO3C028198.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.3e-10 69.3 57 61.4
MELO3C027571.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.3e-10 68.9 63 63.5
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.3e-10 68.9 117 34.2
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 9.7e-10 67.8 149 32.9
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 9.7e-10 67.8 149 32.9
MELO3C033645.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-09 67.4 143 35.0
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.2e-09 66.6 97 36.1
CsaV3_1G030690 Cucumis sativus L. HOM05D000539 ORTHO05D000592 2.8e-09 66.2 79 48.1
FAN10G4183 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.7e-09 65.9 133 30.1
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.8e-09 65.5 143 35.0
CsaV3_3G021520 Cucumis sativus L. HOM05D000539 ORTHO05D000592 6.3e-09 65.1 59 57.6
RcHm_v2.0_Chr3g0471941 Rosa chinensis HOM05D000539 ORTHO05D000592 6.3e-09 65.1 148 31.1
MELO3C028814.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.2e-09 64.7 121 38.0
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 8.2e-09 64.7 149 32.2
MELO3C027923.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.1e-08 64.3 106 34.9
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.1e-08 64.3 154 29.9
RcHm_v2.0_Chr5g0020841 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-08 64.3 154 30.5
MELO3C029090.2 Cucumis melo HOM05D008781 ORTHO05D000592 1.4e-08 63.9 76 46.1
Prupe.8G058300 Prunus persica HOM05D000539 ORTHO05D000592 1.4e-08 63.9 130 30.8
RcHm_v2.0_Chr6g0271071 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-08 63.9 153 30.1
MELO3C031428.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.4e-08 63.2 105 36.2
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 2.4e-08 63.2 142 32.4
Sed0014210 Sechium edule HOM05D007110 ORTHO05D000592 2.4e-08 63.2 72 45.8
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 3.1e-08 62.8 77 41.6
MELO3C028463.2 Cucumis melo HOM05D000539 ORTHO05D000592 3.1e-08 62.8 80 42.5
RcHm_v2.0_Chr4g0391241 Rosa chinensis HOM05D000539 ORTHO05D000592 4.1e-08 62.4 154 29.9
MELO3C033953.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.9e-08 61.6 112 35.7
MELO3C035661.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.9e-08 61.6 38 81.6
FvH4_3g21081 Fragaria vesca HOM05D000539 ORTHO05D000592 6.9e-08 61.6 148 29.7
MELO3C034786.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.2e-07 60.8 142 35.9
FAN18G0712 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-07 60.8 126 37.3
FAN18G4025 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.2e-07 60.8 126 38.1
MELO3C034533.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.5e-07 60.5 141 33.3
Atru.chr7.1246 Acer truncatum HOM05D000539 ORTHO05D000592 2.0e-07 60.1 122 34.4
MELO3C031391.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.6e-07 59.7 74 48.6
RcHm_v2.0_Chr2g0164701 Rosa chinensis HOM05D000539 ORTHO05D000592 2.6e-07 59.7 141 29.8
MELO3C034478.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.5e-07 58.9 31 83.9
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.9e-07 58.5 154 28.6
MELO3C029948.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.9e-07 58.5 80 40.0
FAN05G1979 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.9e-07 58.5 147 29.9
MELO3C035055.2 Cucumis melo HOM05D000004 ORTHO05D000002 7.7e-07 58.2 130 33.8
FAN09G4698 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.7e-07 58.2 147 29.9
Prupe.1G185000 Prunus persica HOM05D000539 ORTHO05D000592 1.0e-06 57.8 146 27.4
SHI07450 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-06 57.8 120 29.2
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-06 57.4 152 27.6
MELO3C034746.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.3e-06 57.4 31 83.9
Prupe.1G310400 Prunus persica HOM05D000539 ORTHO05D000592 1.3e-06 57.4 146 27.4
Prupe.5G062900 Prunus persica HOM05D000539 ORTHO05D000592 1.3e-06 57.4 146 27.4
Prupe.8G055800 Prunus persica HOM05D000539 ORTHO05D000592 1.3e-06 57.4 146 27.4
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.3e-06 57.4 115 32.2
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.3e-06 57.4 118 32.2
RhsimUnG0040200 Rhododendron simsii HOM05D000539 ORTHO05D000592 1.3e-06 57.4 118 32.2
Sed0011074 Sechium edule HOM05D007110 ORTHO05D000592 1.3e-06 57.4 59 52.5
FAN08G0188 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 57.0 126 36.5
FAN10G2166 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 57.0 75 37.3
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 146 27.4
Prupe.2G045600 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 146 27.4
Prupe.3G103000 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 146 28.1
Prupe.4G198900 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 172 25.6
Prupe.5G051700 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 146 27.4
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.0 146 27.4
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 57.0 154 29.2
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.7e-06 57.0 154 29.2
MELO3C028643.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.2e-06 56.6 143 32.9
ECA246G2093 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.2e-06 56.6 122 29.5
FAN22G1432 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.2e-06 56.6 126 35.7
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 2.2e-06 56.6 146 26.7
Prupe.2G062000 Prunus persica HOM05D000539 ORTHO05D000592 2.2e-06 56.6 146 26.7
Prupe.2G157500 Prunus persica HOM05D000539 ORTHO05D000592 2.2e-06 56.6 146 26.7
Prupe.4G092400 Prunus persica HOM05D000539 ORTHO05D000592 2.2e-06 56.6 146 27.4
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 2.9e-06 56.2 146 27.4
Prupe.1G199400 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.1G202700 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.1G237300 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.2G094600 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 2.9e-06 56.2 146 27.4
Prupe.3G118800 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.3G129900 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.5G023300 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.6G142900 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.6G200000 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 26.7
Prupe.8G059600 Prunus persica HOM05D000539 ORTHO05D000592 2.9e-06 56.2 146 27.4
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.9e-06 56.2 144 31.2
MELO3C033823.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.8e-06 55.8 31 83.9
FAN28G2905 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-06 55.8 154 29.9
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 3.8e-06 55.8 146 26.7
Prupe.2G090400 Prunus persica HOM05D000539 ORTHO05D000592 3.8e-06 55.8 146 26.7
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 55.5 136 30.1
FAN22G0206 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 55.5 126 35.7
Prupe.1G183700 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 55.5 146 26.7
Prupe.6G137200 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 55.5 179 26.8
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 55.5 146 27.4
ClCG02G012700 Citrullus lanatus HOM05D000539 ORTHO05D000592 6.5e-06 55.1 40 72.5
Prupe.7G036200 Prunus persica HOM05D000539 ORTHO05D000592 6.5e-06 55.1 146 26.7
MELO3C030650.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.5e-06 54.7 49 57.1
MELO3C032086.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.5e-06 54.7 29 82.8
FAN20G0505 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.5e-06 54.7 118 33.1
Prupe.4G261200 Prunus persica HOM05D000539 ORTHO05D000592 8.5e-06 54.7 146 26.7
Prupe.5G040600 Prunus persica HOM05D000539 ORTHO05D000592 8.5e-06 54.7 124 29.0
Prupe.7G033400 Prunus persica HOM05D000539 ORTHO05D000592 8.5e-06 54.7 146 26.0
Prupe.8G047800 Prunus persica HOM05D000539 ORTHO05D000592 8.5e-06 54.7 136 27.9
RcHm_v2.0_Chr4g0401821 Rosa chinensis HOM05D000539 ORTHO05D000592 8.5e-06 54.7 154 28.6


User provided reference genes

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