Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028507.2 Cucumis melo HOM05D002560 ORTHO05D013637 1.6e-36 155.6 80 100.0
ClCG04G006550 Citrullus lanatus HOM05D002560 ORTHO05D003782 4.5e-31 137.5 78 93.6
CsaV3_4G026950 Cucumis sativus L. HOM05D002560 ORTHO05D003782 4.5e-31 137.5 78 93.6
Sed0022812 Sechium edule HOM05D002560 ORTHO05D003782 4.5e-31 137.5 78 93.6
AUR62006330 Chenopodium quinoa HOM05D002560 ORTHO05D003782 2.7e-28 128.3 77 84.4
AUR62026368 Chenopodium quinoa HOM05D002560 ORTHO05D003782 2.7e-28 128.3 77 84.4
Glyma.09G278500 Glycine max HOM05D002560 ORTHO05D003782 2.7e-28 128.3 78 84.6
Phvul.008G087800 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 2.7e-28 128.3 78 84.6
arahy.Tifrunner.gnm1.ann1.7K02KP Arachis hypogaea HOM05D002560 ORTHO05D003782 3.6e-28 127.9 78 84.6
arahy.Tifrunner.gnm1.ann1.D1231E Arachis hypogaea HOM05D002560 ORTHO05D003782 3.6e-28 127.9 78 84.6
arahy.Tifrunner.gnm1.ann1.PPI0JG Arachis hypogaea HOM05D002560 ORTHO05D003782 3.6e-28 127.9 78 84.6
Nn2g13307 Nelumbo nucifera HOM05D002560 ORTHO05D003782 3.6e-28 127.9 77 85.7
VMungo1383G3009 Vigna mungo HOM05D002560 ORTHO05D003782 3.6e-28 127.9 78 83.3
EL10Ac7g17038 Beta vulgaris HOM05D002560 ORTHO05D003782 4.6e-28 127.5 77 85.7
Gohir.A10G147600 Gossypium hirsutum HOM05D002560 ORTHO05D003782 4.6e-28 127.5 77 85.7
Gorai.011G130300 Gossypium raimondii HOM05D002560 ORTHO05D003782 4.6e-28 127.5 77 85.7
Prupe.6G288100 Prunus persica HOM05D002560 ORTHO05D003782 4.6e-28 127.5 77 85.7
Ca_07738_v3 Cicer arietinum L. HOM05D002560 ORTHO05D003782 6.1e-28 127.1 78 83.3
Lalb_Chr19g0124111 Lupinus albus HOM05D002560 ORTHO05D003782 6.1e-28 127.1 78 82.1
MD04G1169600 Malus domestica HOM05D002560 ORTHO05D003782 6.1e-28 127.1 77 85.7
MD12G1183600 Malus domestica HOM05D002560 ORTHO05D003782 6.1e-28 127.1 77 85.7
TPR.G35291 Trifolium pratense HOM05D002560 ORTHO05D003782 6.1e-28 127.1 78 82.1
arahy.Tifrunner.gnm1.ann1.6VEX49 Arachis hypogaea HOM05D002560 ORTHO05D003782 7.9e-28 126.7 78 84.6
Glyma.18G210300 Glycine max HOM05D002560 ORTHO05D003782 7.9e-28 126.7 78 83.3
TAR369G0139 Trochodendron aralioides HOM05D002560 ORTHO05D003782 7.9e-28 126.7 77 83.1
Hund19809 Selenicereus undatus HOM05D002560 ORTHO05D003782 1.0e-27 126.3 76 85.5
arahy.Tifrunner.gnm1.ann1.TV2NT7 Arachis hypogaea HOM05D002560 ORTHO05D003782 1.4e-27 125.9 78 83.3
Gohir.D10G118500 Gossypium hirsutum HOM05D002560 ORTHO05D003782 1.4e-27 125.9 77 84.4
Medtr7g072330 Medicago truncatula HOM05D002560 ORTHO05D003782 1.4e-27 125.9 78 82.1
Psat3g122440 Pisum sativum HOM05D002560 ORTHO05D003782 1.4e-27 125.9 78 82.1
Ah.08g209810 Amaranthus hybridus HOM05D002560 ORTHO05D003782 1.8e-27 125.6 77 83.1
arahy.Tifrunner.gnm1.ann1.IZK0HU Arachis hypogaea HOM05D002560 ORTHO05D003782 1.8e-27 125.6 78 83.3
Dinv35441 Davidia involucrata HOM05D002560 ORTHO05D003782 1.8e-27 125.6 77 83.1
Duzib212G0261 Durio zibethinus HOM05D002560 ORTHO05D003782 1.8e-27 125.6 77 84.4
Phvul.008G088100 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 1.8e-27 125.6 78 82.1
GSVIVG01030232001 Vitis vinifera HOM05D002560 ORTHO05D003782 1.8e-27 125.6 77 80.5
Atru.chr8.2363 Acer truncatum HOM05D002560 ORTHO05D013637 2.3e-27 125.2 77 81.8
CiPaw.10G163200 Carya illinoinensis HOM05D002560 ORTHO05D003782 2.3e-27 125.2 77 84.4
COL.COLO4_08633 Corchorus olitorius HOM05D002560 ORTHO05D003782 2.3e-27 125.2 77 84.4
arahy.Tifrunner.gnm1.ann1.QBUW59 Arachis hypogaea HOM05D002560 ORTHO05D013637 3.0e-27 124.8 78 83.3
Lj3C943G3 Lonicera japonica HOM05D002560 ORTHO05D003782 3.0e-27 124.8 77 83.1
CANSAT35G0319 Cannabis sativa HOM05D002560 ORTHO05D003782 3.9e-27 124.4 78 80.8
Cfa017080 Carpinus fangiana HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 83.1
Haze_21118 Corylus avellana HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 83.1
Duzib268G0573 Durio zibethinus HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 83.1
Nitab4.5_0004394g0020 Nicotiana tabacum HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 81.8
Rhsim04G0123300 Rhododendron simsii HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 83.1
Solyc09g014780.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 81.8
Sopen09g007660 Solanum pennellii HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 81.8
PGSC0003DMG400017035 Solanum tuberosum HOM05D002560 ORTHO05D003782 3.9e-27 124.4 77 81.8
CAN.G1189.1 Capsicum annuum HOM05D002560 ORTHO05D003782 5.1e-27 124.0 77 81.8
CDE12G0125 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 5.1e-27 124.0 77 80.5
Lj1g0007869 Lotus japonicus HOM05D002560 ORTHO05D003782 5.1e-27 124.0 78 83.3
Ciclev10010918m.g Citrus clementina HOM05D002560 ORTHO05D003782 6.7e-27 123.6 77 83.1
Actinidia11535 Actinidia chinensis HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 80.5
arahy.Tifrunner.gnm1.ann1.DD37CG Arachis hypogaea HOM05D002560 ORTHO05D013637 8.8e-27 123.2 78 82.1
Duzib151G0314 Durio zibethinus HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 83.1
Gohir.A02G005400 Gossypium hirsutum HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 83.1
Gohir.D02G005900 Gossypium hirsutum HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 83.1
Gorai.005G006600 Gossypium raimondii HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 83.1
Peaxi162Scf00744g00021 Petunia axillaris HOM05D002560 ORTHO05D003782 8.8e-27 123.2 77 81.8
CDE04G1751 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 1.1e-26 122.9 77 80.5
Cpa.g.sc86.9 Carica papaya HOM05D002560 ORTHO05D013637 2.0e-26 122.1 77 80.5
TPR.G35288 Trifolium pratense HOM05D002560 ORTHO05D003782 2.0e-26 122.1 78 79.5
TWI53G1929 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 2.0e-26 122.1 79 79.7
TWI77G0423 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 2.0e-26 122.1 79 79.7
arahy.Tifrunner.gnm1.ann1.UH8YKH Arachis hypogaea HOM05D002560 ORTHO05D013637 2.5e-26 121.7 78 80.8
Migut.J00073 Erythranthe guttata HOM05D002560 ORTHO05D003782 3.3e-26 121.3 77 80.5
Sc02g0000740 Simmondsia chinensis HOM05D002560 ORTHO05D003782 3.3e-26 121.3 75 82.7
Hma1.2p1_1349F.1_g277330 Hydrangea macrophylla HOM05D002560 ORTHO05D013637 4.3e-26 120.9 77 81.8
PSO017G3901 Papaver somniferum HOM05D002560 ORTHO05D003782 4.3e-26 120.9 77 76.6
PSO170G0779 Papaver somniferum HOM05D002560 ORTHO05D003782 4.3e-26 120.9 77 76.6
TAR623G1646 Trochodendron aralioides HOM05D002560 ORTHO05D003782 4.3e-26 120.9 77 81.8
Aa31LG1G23430 Aethionema arabicum HOM05D002560 ORTHO05D003782 5.7e-26 120.6 77 83.1
CiPaw.09G217200 Carya illinoinensis HOM05D002560 ORTHO05D003782 5.7e-26 120.6 77 80.5
Cpa.g.sc86.11 Carica papaya HOM05D002560 ORTHO05D013637 7.4e-26 120.2 76 80.3
MBI15_g10510_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D003782 7.4e-26 120.2 77 83.1
vmacro20346 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 7.4e-26 120.2 78 79.5
AUR62006388 Chenopodium quinoa HOM05D002560 ORTHO05D003782 9.7e-26 119.8 77 79.2
AUR62029728 Chenopodium quinoa HOM05D002560 ORTHO05D003782 9.7e-26 119.8 76 78.9
Hund03758 Selenicereus undatus HOM05D002560 ORTHO05D003782 9.7e-26 119.8 77 84.4
Thecc.04G156800 Theobroma cacao HOM05D002560 ORTHO05D003782 1.3e-25 119.4 77 79.2
Actinidia20781 Actinidia chinensis HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 80.5
BcaC05g29622 Brassica carinata HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 81.8
A05p39970 Brassica napus HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 81.8
C05p59010 Brassica napus HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 81.8
BolC5t34554H Brassica oleracea HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 81.8
CARHR083160 Cardamine hirsuta HOM05D002560 ORTHO05D003782 1.7e-25 119.0 77 81.8
PGR004G0247 Punica granatum HOM05D002560 ORTHO05D003782 2.2e-25 118.6 78 80.8
Sc20g0006790 Simmondsia chinensis HOM05D002560 ORTHO05D003782 2.2e-25 118.6 77 77.9
HanXRQChr10g0288601 Helianthus annuus HOM05D002560 ORTHO05D003782 2.8e-25 118.2 84 75.0
Lsat_1_v5_gn_9_38100 Lactuca sativa HOM05D002560 ORTHO05D003782 2.8e-25 118.2 84 75.0
AL3G19840 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 3.7e-25 117.9 77 80.5
AT3G08850 Arabidopsis thaliana HOM05D002560 ORTHO05D003782 3.7e-25 117.9 77 80.5
Thhalv10019904m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 3.7e-25 117.9 77 80.5
Sp3g07250 Schrenkiella parvula HOM05D002560 ORTHO05D003782 3.7e-25 117.9 77 80.5
BcaB04g18570 Brassica carinata HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
BcaC01g04199 Brassica carinata HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
BolC3t16666H Brassica oleracea HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
BraA03t12804Z Brassica rapa HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
Carub.0003s0796 Capsella rubella HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
Manes.08G174400 Manihot esculenta HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 80.5
Potri.006G106600 Populus trichocarpa HOM05D002560 ORTHO05D003782 4.8e-25 117.5 77 77.9
Eucgr.K01267 Eucalyptus grandis HOM05D002560 ORTHO05D003782 6.3e-25 117.1 78 76.9
Zm00001eb404940 Zea mays HOM05D002560 ORTHO05D003782 8.2e-25 116.7 77 76.6
HanXRQChr10g0288611 Helianthus annuus HOM05D002560 ORTHO05D003782 1.1e-24 116.3 77 77.9
Os12g0110000 Oryza sativa ssp. japonica HOM05D002560 ORTHO05D003782 1.1e-24 116.3 77 76.6
TAR636G3231 Trochodendron aralioides HOM05D002560 ORTHO05D003782 1.1e-24 116.3 77 79.2
HPP92_015583 Vanilla planifolia HOM05D002560 ORTHO05D003782 1.1e-24 116.3 75 77.3
Aa31LG5G18820 Aethionema arabicum HOM05D002560 ORTHO05D003782 1.4e-24 115.9 77 79.2
Potri.016G132000 Populus trichocarpa HOM05D002560 ORTHO05D003782 1.4e-24 115.9 77 76.6
THA.LOC104816173 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 1.4e-24 115.9 77 80.5
Actinidia29053 Actinidia chinensis HOM05D002560 ORTHO05D003782 1.8e-24 115.5 77 75.3
MSTRG.18962 Avicennia marina HOM05D002560 ORTHO05D003782 1.8e-24 115.5 77 76.6
CSS0020454 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 2.4e-24 115.2 76 76.3
Sp6g41030 Schrenkiella parvula HOM05D002560 ORTHO05D003782 2.4e-24 115.2 77 79.2
THA.LOC104823313 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 2.4e-24 115.2 78 78.2
AL6G10260 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 3.1e-24 114.8 77 79.2
FvH4_6g10400 Fragaria vesca HOM05D002560 ORTHO05D003782 3.1e-24 114.8 98 66.3
FAN05G0561 Fragaria x ananassa HOM05D002560 ORTHO05D003782 3.1e-24 114.8 98 66.3
FAN05G5301 Fragaria x ananassa HOM05D002560 ORTHO05D003782 3.1e-24 114.8 98 66.3
FAN09G2734 Fragaria x ananassa HOM05D002560 ORTHO05D003782 3.1e-24 114.8 98 66.3
FAN14G2820 Fragaria x ananassa HOM05D002560 ORTHO05D003782 3.1e-24 114.8 98 66.3
HanXRQChr15g0463501 Helianthus annuus HOM05D002560 ORTHO05D003782 3.1e-24 114.8 83 74.7
THA.LOC104827066 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 3.1e-24 114.8 77 79.2
ECA247G0799 Erigeron canadensis HOM05D002560 ORTHO05D003782 4.1e-24 114.4 71 81.7
Oeu057979.2 Olea europaea HOM05D002560 ORTHO05D003782 4.1e-24 114.4 75 78.7
Sabra04G0150100 Salix brachista HOM05D002560 ORTHO05D003782 4.1e-24 114.4 77 75.3
Aqoxy4G02161 Aquilegia oxysepala HOM05D002560 ORTHO05D003782 5.3e-24 114.0 73 80.8
CSS0041781 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 5.3e-24 114.0 81 75.3
Cc06_g00590 Coffea canephora HOM05D002560 ORTHO05D003782 5.3e-24 114.0 77 75.3
Nitab4.5_0000047g0010 Nicotiana tabacum HOM05D002560 ORTHO05D003782 5.3e-24 114.0 71 83.1
Os11g0109933 Oryza sativa ssp. japonica HOM05D002560 ORTHO05D003782 5.3e-24 114.0 77 75.3
Sopen10g027930 Solanum pennellii HOM05D002560 ORTHO05D013637 5.3e-24 114.0 77 76.6
Lalb_Chr01g0023591 Lupinus albus HOM05D002560 ORTHO05D003782 6.9e-24 113.6 73 80.8
Peaxi162Scf00595g00112 Petunia axillaris HOM05D002560 ORTHO05D003782 6.9e-24 113.6 77 72.7
Sabra06G0083000 Salix brachista HOM05D002560 ORTHO05D003782 9.1e-24 113.2 77 75.3
Manes.09G114600 Manihot esculenta HOM05D002560 ORTHO05D003782 1.2e-23 112.8 77 77.9
Nn2g11069 Nelumbo nucifera HOM05D002560 ORTHO05D003782 1.5e-23 112.5 70 84.3
MSTRG.5523 Avicennia marina HOM05D002560 ORTHO05D003782 2.0e-23 112.1 77 74.0
Rhsim05G0228200 Rhododendron simsii HOM05D002560 ORTHO05D003782 2.0e-23 112.1 78 76.9
Sopen10g027890 Solanum pennellii HOM05D002560 ORTHO05D013637 2.6e-23 111.7 77 75.3
CARHR212130 Cardamine hirsuta HOM05D002560 ORTHO05D003782 5.9e-23 110.5 77 74.0
SGA_v2.0_scaffold85G26659 Striga asiatica HOM05D002560 ORTHO05D003782 5.9e-23 110.5 77 74.0
Zm00001eb093980 Zea mays HOM05D002560 ORTHO05D003782 5.9e-23 110.5 77 72.7
Thhalv10012449m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 1.7e-22 109.0 77 75.3
FAN02G0292 Fragaria x ananassa HOM05D002560 ORTHO05D003782 1.7e-22 109.0 98 64.3
RcHm_v2.0_Chr3g0461291 Rosa chinensis HOM05D002560 ORTHO05D003782 2.2e-22 108.6 95 66.3
QL07p033277 Quercus lobata HOM05D002560 ORTHO05D003782 2.9e-22 108.2 77 74.0
Zm00001eb195140 Zea mays HOM05D002560 ORTHO05D003782 5.0e-22 107.5 77 74.0
Hma1.2p1_0174F.1_g077050 Hydrangea macrophylla HOM05D002560 ORTHO05D003782 8.5e-22 106.7 77 66.2
DCAR_015351 Daucus carota HOM05D002560 ORTHO05D003782 1.4e-21 105.9 70 77.1
Glyma.09G278700 Glycine max HOM05D002560 ORTHO05D013637 5.5e-21 104.0 73 76.7
DCAR_023988 Daucus carota HOM05D002560 ORTHO05D003782 2.7e-20 101.7 70 75.7
vmacro08922 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 6.1e-20 100.5 128 50.0
Mapoly0002s0262 Marchantia polymorpha HOM05D002560 ORTHO05D003782 6.7e-19 97.1 74 67.6
Pp3c25_7220 Physcomitrium patens HOM05D002560 ORTHO05D003782 1.1e-18 96.3 83 61.4
Pp3c15_3360 Physcomitrium patens HOM05D002560 ORTHO05D003782 2.6e-18 95.1 82 61.0
Lj2C63G17 Lonicera japonica HOM05D002560 ORTHO05D003782 3.7e-17 91.3 76 59.2
CSS0033860 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 4.8e-17 90.9 74 63.5
Pp3c9_4770 Physcomitrium patens HOM05D002560 ORTHO05D003782 8.2e-17 90.1 82 57.3
AagrBONN_evm.TU.Sc2ySwM_228.3097 Anthoceros agrestis HOM05D002560 ORTHO05D003782 9.1e-16 86.7 74 55.4
Pp3c17_3950 Physcomitrium patens HOM05D002560 ORTHO05D003782 1.9e-13 79.0 83 53.0
ATR0681G092 Amborella trichopoda HOM05D002560 ORTHO05D013637 2.5e-13 78.6 60 71.7
unitig_27.g24878 Utricularia gibba HOM05D002560 ORTHO05D003782 2.5e-13 78.6 59 72.9
SMO116G0458 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 4.2e-13 77.8 71 54.9
RcHm_v2.0_Chr3g0492271 Rosa chinensis HOM05D002560 ORTHO05D013637 6.1e-12 73.9 55 74.5
SMO334G0080 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 1.3e-09 66.2 79 45.6
GSVIVG01030231001 Vitis vinifera HOM05D002560 ORTHO05D013637 1.3e-09 66.2 72 50.0
CBR_g54859 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-07 59.7 79 44.3
GSVIVG01018311001 Vitis vinifera HOM05D002560 ORTHO05D013637 2.7e-07 58.5 51 62.7
PRCOL_00002325 Prasinoderma coloniale HOM05D002560 ORTHO05D003782 5.9e-07 57.4 79 44.3


User provided reference genes

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