Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028441.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.9e-134 481.9 240 100.0
MELO3C001165.2 Cucumis melo HOM05D003455 ORTHO05D004165 4.6e-31 139.0 87 80.5
MELO3C029630.2 Cucumis melo HOM05D000320 ORTHO05D006032 3.3e-29 132.9 73 84.9
MELO3C034518.2 Cucumis melo HOM05D000539 ORTHO05D000592 7.4e-29 131.7 68 91.2
MELO3C029173.2 Cucumis melo HOM05D005049 ORTHO05D006032 2.4e-27 126.7 69 87.0
MELO3C032147.2 Cucumis melo HOM05D005049 ORTHO05D006032 4.2e-24 115.9 68 85.3
MELO3C033889.2 Cucumis melo HOM05D005049 ORTHO05D006032 9.7e-21 104.8 54 90.7
MELO3C031470.2 Cucumis melo HOM05D005049 ORTHO05D006032 4.8e-20 102.4 61 78.7
MELO3C035514.2 Cucumis melo HOM05D005049 ORTHO05D006032 9.1e-19 98.2 64 73.4
MELO3C035028.2 Cucumis melo HOM05D005049 ORTHO05D006032 5.9e-18 95.5 55 81.8
MELO3C034539.2 Cucumis melo HOM05D005049 ORTHO05D006032 1.4e-16 90.9 46 91.3
MELO3C035580.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.5e-16 89.0 45 93.3
MELO3C028477.2 Cucumis melo HOM05D001651 ORTHO05D009716 1.8e-14 84.0 46 93.5
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-09 66.6 71 43.7
Sed0011074 Sechium edule HOM05D007110 ORTHO05D000592 5.0e-09 65.9 66 43.9
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-08 63.5 68 42.6
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-08 63.5 68 42.6
CsaV3_6G018870 Cucumis sativus L. HOM05D000539 ORTHO05D000592 4.2e-08 62.8 68 45.6
MD01G1047900 Malus domestica HOM05D000539 ORTHO05D000592 4.2e-08 62.8 69 42.0
CsaV3_1G045370 Cucumis sativus L. HOM05D000539 ORTHO05D000592 5.5e-08 62.4 50 52.0
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 9.4e-08 61.6 68 41.2
MELO3C031428.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.6e-07 60.8 66 40.9
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 2.1e-07 60.5 75 36.0
Sed0024905 Sechium edule HOM05D000539 ORTHO05D000592 2.7e-07 60.1 68 47.1
MELO3C032093.2 Cucumis melo HOM05D000539 ORTHO05D000592 4.7e-07 59.3 73 42.5
Sed0026544 Sechium edule HOM05D000539 ORTHO05D000592 6.1e-07 58.9 54 51.9
RcHm_v2.0_Chr6g0261571 Rosa chinensis HOM05D000539 ORTHO05D000592 8.0e-07 58.5 66 40.9
MELO3C029581.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.0e-06 58.2 53 49.1
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.0e-06 58.2 70 37.1
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.0e-06 58.2 70 37.1
ECA236G3736 Erigeron canadensis HOM05D000539 ORTHO05D000233 1.4e-06 57.8 48 52.1
Sed0016665 Sechium edule HOM05D000539 ORTHO05D000592 1.4e-06 57.8 51 47.1
Sed0019626 Sechium edule HOM05D000539 ORTHO05D000592 1.4e-06 57.8 51 47.1
MELO3C035111.2 Cucumis melo HOM05D000539 ORTHO05D000592 1.8e-06 57.4 45 55.6
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.8e-06 57.4 70 37.1
MELO3C035686.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-06 57.0 46 52.2
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-06 56.6 70 35.7
CsaV3_1G030690 Cucumis sativus L. HOM05D000539 ORTHO05D000592 3.9e-06 56.2 68 38.2
Sed0014995 Sechium edule HOM05D000539 ORTHO05D000592 3.9e-06 56.2 57 40.4
MELO3C034193.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.2e-06 55.8 52 48.1
Sed0004440 Sechium edule HOM05D000539 ORTHO05D000592 5.2e-06 55.8 51 45.1
Sed0019579 Sechium edule HOM05D000539 ORTHO05D000592 5.2e-06 55.8 51 45.1
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 6.7e-06 55.5 50 44.0
MELO3C000336.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.8e-06 55.1 45 53.3
MELO3C028463.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.8e-06 55.1 45 53.3
MELO3C029948.2 Cucumis melo HOM05D000539 ORTHO05D000592 8.8e-06 55.1 45 53.3
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 8.8e-06 55.1 50 42.0
Sed0011271 Sechium edule HOM05D000539 ORTHO05D000592 8.8e-06 55.1 51 45.1


User provided reference genes

Program Settings