Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-101 372.1 195 100.0
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-96 356.7 189 98.4
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.7e-90 334.7 178 97.2
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 8.6e-76 287.3 181 82.3
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-69 266.5 155 91.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 5.6e-67 258.1 181 74.6
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 4.7e-66 255.0 181 70.2
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.6e-61 238.4 183 72.1
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.5e-59 230.7 184 65.8
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.8e-58 229.2 156 76.3
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 8.9e-57 224.2 171 67.8
MELO3C029576.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.4e-56 221.9 197 64.5
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.3e-47 191.0 147 69.4
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-42 174.5 175 53.1
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.7e-39 166.8 182 51.6
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-35 153.3 86 82.6
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-34 147.9 179 43.6
MELO3C034299.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.1e-33 146.0 96 93.8
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.6e-32 141.4 92 62.0
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.9e-32 141.0 165 42.4
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 3.8e-31 139.0 93 62.4
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-30 137.5 83 69.9
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.1e-30 137.5 93 61.3
MELO3C019328.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-29 134.0 102 80.4
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-29 132.5 137 51.1
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.5e-29 132.5 88 63.6
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 2.3e-28 129.8 85 63.5
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 3.9e-28 129.0 181 40.3
MELO3C029566.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-27 126.7 106 65.1
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-27 126.7 94 60.6
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 9.6e-27 124.4 88 60.2
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.6e-26 123.6 112 55.4
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-26 121.7 151 41.7
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 1.4e-25 120.6 86 60.5
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-25 119.8 131 46.6
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-24 117.1 91 51.6
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.3e-23 114.0 84 53.6
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 2.2e-23 113.2 99 51.5
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-22 110.9 64 76.6
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.4e-22 109.8 70 68.6
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.5e-21 105.9 65 60.0
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 7.9e-21 104.8 91 50.5
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 5.1e-20 102.1 178 35.4
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.3e-19 99.4 179 34.6
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 2.1e-18 96.7 130 44.6
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.7e-18 95.9 180 35.0
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 8.1e-18 94.7 172 33.1
MELO3C028630.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-18 94.7 62 67.7
MELO3C029734.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.3e-17 92.0 61 60.7
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.2e-16 90.9 62 56.5
MELO3C033635.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-16 89.7 48 77.1
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 1.7e-15 87.0 92 41.3
MELO3C000505.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-14 84.3 40 92.5
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-14 84.3 182 30.2
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 1.9e-14 83.6 114 39.5
ClCG10G008410 Citrullus lanatus HOM05D007314 ORTHO05D003768 2.4e-14 83.2 65 78.5
MELO3C031375.2 Cucumis melo HOM05D008781 ORTHO05D003768 2.4e-14 83.2 96 40.6
MELO3C031186.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.1e-14 81.6 121 45.5
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 1.2e-13 80.9 178 32.0
MELO3C034816.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-13 80.9 113 47.8
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.6e-13 79.0 82 42.7
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 4.6e-13 79.0 73 45.2
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 4.6e-13 79.0 232 28.0
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 6.0e-13 78.6 74 47.3
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 2.3e-12 76.6 85 38.8
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 3.0e-12 76.3 91 40.7
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 3.9e-12 75.9 188 32.4
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 5.1e-12 75.5 129 31.8
PSO675G1909 Papaver somniferum HOM05D008526 ORTHO05D010380 5.1e-12 75.5 125 32.8
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 8.7e-12 74.7 79 45.6
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 1.1e-11 74.3 77 41.6
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.9e-11 73.6 86 41.9
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 2.5e-11 73.2 189 29.6
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.5e-11 73.2 194 29.4
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 3.3e-11 72.8 185 31.4
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 3.3e-11 72.8 190 24.7
MELO3C000282.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-11 72.0 35 88.6
MELO3C032661.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-11 72.0 42 61.9
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 7.4e-11 71.6 51 56.9
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 9.6e-11 71.2 118 34.7
PSO210G2358 Papaver somniferum HOM05D008526 ORTHO05D010380 1.3e-10 70.9 100 35.0
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.6e-10 70.5 96 36.5
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 1.6e-10 70.5 181 29.8
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.1e-10 70.1 73 42.5
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 2.1e-10 70.1 73 41.1
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 3.7e-10 69.3 210 29.0
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.8e-10 68.9 73 41.1
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 6.2e-10 68.6 87 39.1
BolC3t20566H Brassica oleracea HOM05D007314 ORTHO05D003768 8.2e-10 68.2 73 35.6
FvH4_1g29373 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-09 67.8 77 40.3
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-09 67.4 72 40.3
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 1.8e-09 67.0 169 30.8
FAN15G1405 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.4e-09 66.6 91 37.4
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-09 66.6 240 25.0
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.3e-09 65.5 176 28.4
Atru.chr4.2623 Acer truncatum HOM05D008321 ORTHO05D003768 6.9e-09 65.1 179 28.5
RcHm_v2.0_Chr1g0326261 Rosa chinensis HOM05D009091 ORTHO05D003768 6.9e-09 65.1 63 49.2
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 9.0e-09 64.7 181 29.3
FAN07G1302 Fragaria x ananassa HOM05D008321 ORTHO05D003768 9.0e-09 64.7 82 39.0
MELO3C032453.2 Cucumis melo HOM05D007314 ORTHO05D034924 1.2e-08 64.3 43 53.5
MELO3C033118.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.0e-08 63.5 37 59.5
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 3.4e-08 62.8 86 37.2
BolC2t10485H Brassica oleracea HOM05D007314 ORTHO05D003768 7.6e-08 61.6 87 35.6
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 7.6e-08 61.6 77 44.2
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 1.3e-07 60.8 136 29.4
CSS0009587 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.8e-07 59.3 62 45.2
CSS0011469 Camellia sinensis var. sinensis HOM05D009091 ORTHO05D003768 3.8e-07 59.3 62 45.2
MELO3C032011.2 Cucumis melo HOM05D011747 ORTHO05D014199 4.9e-07 58.9 79 44.3
FAN12G0755 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.1e-06 57.8 141 29.8
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 1.1e-06 57.8 135 34.1
ClCG02G008860 Citrullus lanatus HOM05D007314 ORTHO05D003768 7.1e-06 55.1 87 43.7
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.3e-06 54.7 185 28.6


User provided reference genes

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