Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027813.2 Cucumis melo HOM05D000872 ORTHO05D165912 2.5e-33 144.8 72 100.0
ClCG04G007020 Citrullus lanatus HOM05D000872 ORTHO05D000777 1.1e-07 59.7 31 96.8
MELO3C003294.2 Cucumis melo HOM05D000872 ORTHO05D000777 1.1e-07 59.7 31 96.8
CsaV3_4G026260 Cucumis sativus L. HOM05D000872 ORTHO05D000777 2.4e-07 58.5 31 93.5
Lj1g0009913 Lotus japonicus HOM05D000872 ORTHO05D000777 2.4e-07 58.5 53 62.3
TPR.G13329 Trifolium pratense HOM05D000872 ORTHO05D000777 2.4e-07 58.5 54 51.9
Medtr7g068380 Medicago truncatula HOM05D000872 ORTHO05D000777 3.1e-07 58.2 53 58.5
Psat2g093080 Pisum sativum HOM05D000872 ORTHO05D000777 3.1e-07 58.2 53 60.4
CANSAT35G1350 Cannabis sativa HOM05D000872 ORTHO05D000777 4.1e-07 57.8 32 87.5
Sed0015413 Sechium edule HOM05D000872 ORTHO05D000777 4.1e-07 57.8 31 90.3
MELO3C034694.2 Cucumis melo HOM05D000872 ORTHO05D022478 9.1e-07 56.6 31 90.3
MELO3C034952.2 Cucumis melo HOM05D000872 ORTHO05D022478 9.1e-07 56.6 31 90.3
SGA_v2.0_scaffold110G31216 Striga asiatica HOM05D000872 ORTHO05D000777 9.1e-07 56.6 32 84.4
Ca_07640_v3 Cicer arietinum L. HOM05D000872 ORTHO05D000777 2.0e-06 55.5 53 54.7
Psat5g301120 Pisum sativum HOM05D000103 ORTHO05D000049 2.0e-06 55.5 31 87.1
BcaC02g11957 Brassica carinata HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
A05p07860 Brassica napus HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
C04p09510 Brassica napus HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
BolC4t22557H Brassica oleracea HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
BraA05t19752Z Brassica rapa HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
CARHR132770 Cardamine hirsuta HOM05D000872 ORTHO05D000777 2.6e-06 55.1 31 87.1
MSTRG.26809 Avicennia marina HOM05D000872 ORTHO05D000777 3.4e-06 54.7 31 83.9
ClCG10G022110 Citrullus lanatus HOM05D000872 ORTHO05D000777 3.4e-06 54.7 45 62.2
Glyma.18G200500 Glycine max HOM05D000872 ORTHO05D000777 3.4e-06 54.7 31 83.9
MD12G1165800 Malus domestica HOM05D000872 ORTHO05D000777 3.4e-06 54.7 31 83.9
Psat3g128600 Pisum sativum HOM05D000872 ORTHO05D000777 3.4e-06 54.7 30 86.7
Sed0000289 Sechium edule HOM05D000872 ORTHO05D000777 3.4e-06 54.7 32 78.1
Aa31sc177G40 Aethionema arabicum HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
AT3G51860 Arabidopsis thaliana HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
BcaC06g33011 Brassica carinata HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
BcaC06g33013 Brassica carinata HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
BcaC06g33356 Brassica carinata HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
BcaC06g33357 Brassica carinata HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
C07p46640 Brassica napus HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
BolC7t45179H Brassica oleracea HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
Carub.0005s1821 Capsella rubella HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
Thhalv10010359m.g Eutrema salsugineum HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 83.9
Lalb_Chr12g0206961 Lupinus albus HOM05D000872 ORTHO05D000777 4.5e-06 54.3 32 78.1
SGA_v2.0_scaffold85G26736 Striga asiatica HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 80.6
VMungo1383G2692 Vigna mungo HOM05D000872 ORTHO05D000777 4.5e-06 54.3 31 80.6
MSTRG.10220 Avicennia marina HOM05D000872 ORTHO05D000777 5.9e-06 53.9 32 75.0
BcaC02g07489 Brassica carinata HOM05D000872 ORTHO05D000777 5.9e-06 53.9 31 83.9
A04p29240 Brassica napus HOM05D000872 ORTHO05D000777 5.9e-06 53.9 31 83.9
C04p66470 Brassica napus HOM05D000872 ORTHO05D000777 5.9e-06 53.9 31 83.9
BolC4t28151H Brassica oleracea HOM05D000872 ORTHO05D000777 5.9e-06 53.9 31 83.9
BraA04t18393Z Brassica rapa HOM05D000872 ORTHO05D000777 5.9e-06 53.9 31 83.9
CiPaw.09G209000 Carya illinoinensis HOM05D000872 ORTHO05D000777 5.9e-06 53.9 32 81.2
Migut.L02011 Erythranthe guttata HOM05D000872 ORTHO05D000777 5.9e-06 53.9 32 81.2
Oeu064501.1 Olea europaea HOM05D000872 ORTHO05D000777 5.9e-06 53.9 35 77.1
QL07p035739 Quercus lobata HOM05D000872 ORTHO05D000777 5.9e-06 53.9 32 81.2
SalBow4G0783 Salvia bowleyana HOM05D000872 ORTHO05D000777 5.9e-06 53.9 32 78.1
Thhalv10016611m.g Eutrema salsugineum HOM05D000872 ORTHO05D000777 7.7e-06 53.5 31 83.9
Oeu037955.2 Olea europaea HOM05D000872 ORTHO05D000777 7.7e-06 53.5 30 83.3
Sp4g20490 Schrenkiella parvula HOM05D000872 ORTHO05D000777 7.7e-06 53.5 31 83.9
TPR.G8146 Trifolium pratense HOM05D000872 ORTHO05D000777 7.7e-06 53.5 31 80.6


User provided reference genes

Program Settings