Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027770.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.1e-30 134.8 59 100.0
MELO3C032492.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.4e-26 122.1 59 93.2
MELO3C034196.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.5e-26 120.2 59 89.8
MELO3C034235.2 Cucumis melo HOM05D000017 ORTHO05D000013 9.3e-26 119.4 59 89.8
MELO3C029426.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.6e-25 117.1 59 88.1
MELO3C028883.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.1e-24 113.6 59 86.4
MELO3C028598.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.1e-23 112.5 59 84.7
MELO3C034754.2 Cucumis melo HOM05D000017 ORTHO05D000013 3.3e-23 110.9 59 84.7
MELO3C027574.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.7e-23 110.2 59 83.1
MELO3C031777.2 Cucumis melo HOM05D000017 ORTHO05D000013 7.7e-20 99.8 59 79.7
MELO3C029360.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.5e-18 94.7 59 78.0
MELO3C031247.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.5e-18 94.7 59 72.9
MELO3C027481.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.5e-18 93.6 59 76.3
MELO3C029995.2 Cucumis melo HOM05D000017 ORTHO05D000013 9.4e-18 92.8 59 78.0
MELO3C031712.2 Cucumis melo HOM05D000017 ORTHO05D000013 9.4e-18 92.8 59 78.0
MELO3C030343.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.1e-17 91.7 59 72.9
MELO3C029824.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.7e-17 91.3 59 74.6
MELO3C033095.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.6e-17 90.5 59 71.2
MELO3C033069.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.3e-16 88.2 55 74.5
MELO3C028837.2 Cucumis melo HOM05D000017 ORTHO05D000013 5.1e-16 87.0 55 72.7
MELO3C029989.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.9e-15 85.1 58 74.1
Oeu012528.1 Olea europaea HOM05D000017 ORTHO05D000013 5.3e-13 77.0 58 53.4
MELO3C033006.2 Cucumis melo HOM05D000017 ORTHO05D000013 6.9e-13 76.6 45 80.0
MELO3C031861.2 Cucumis melo HOM05D000017 ORTHO05D000013 1.5e-12 75.5 44 77.3
Oeu055528.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-12 75.1 58 51.7
Oeu001753.1 Olea europaea HOM05D000017 ORTHO05D000013 2.6e-12 74.7 58 53.4
Oeu000015.1 Olea europaea HOM05D000017 ORTHO05D000013 1.7e-11 72.0 58 50.0
Oeu041855.1 Olea europaea HOM05D000017 ORTHO05D000013 8.5e-11 69.7 58 50.0
Oeu005233.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-10 69.3 58 50.0
Oeu037740.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-10 69.3 58 50.0
Oeu055206.1 Olea europaea HOM05D000017 ORTHO05D000013 2.5e-10 68.2 57 50.9
Oeu027638.1 Olea europaea HOM05D000017 ORTHO05D000013 4.2e-10 67.4 58 48.3
Oeu053659.1 Olea europaea HOM05D000017 ORTHO05D000013 7.2e-10 66.6 58 44.8
CANSAT01G2148 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-09 65.9 55 50.9
TWI63G0971 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-09 65.5 55 49.1
Oeu043718.1 Olea europaea HOM05D000017 ORTHO05D000013 3.6e-09 64.3 58 44.8
TWI38G0900 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-09 63.9 55 47.3
TWI38G1855 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-09 63.9 55 47.3
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-09 63.9 55 47.3
TWI74G1513 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-09 63.9 55 47.3
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-09 63.9 55 47.3
Oeu023181.1 Olea europaea HOM05D000017 ORTHO05D000013 6.1e-09 63.5 58 43.1
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 6.1e-09 63.5 58 43.1
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 7.9e-09 63.2 55 49.1
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.0e-08 62.8 55 47.3
CAN.G114.4 Capsicum annuum HOM05D006372 ORTHO05D007484 1.8e-08 62.0 58 48.3
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.3e-08 61.6 55 45.5
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.3e-08 61.6 55 45.5
CANSAT54G0192 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-08 61.2 49 53.1
Oeu009473.1 Olea europaea HOM05D000017 ORTHO05D000013 3.0e-08 61.2 58 41.4
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-08 60.8 55 45.5
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 3.9e-08 60.8 58 41.4
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT11G0851 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 53 47.2
CANSAT35G0491 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 58 41.4
CANSAT54G1378 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 53 47.2
CANSAT64G1570 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT80G0351 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 55 45.5
CANSAT80G1128 Cannabis sativa HOM05D000017 ORTHO05D000013 5.1e-08 60.5 53 47.2
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-08 60.1 55 45.5
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 6.7e-08 60.1 55 45.5
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-08 59.7 58 39.7
CANSAT56G0213 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-08 59.7 58 39.7
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 8.8e-08 59.7 58 37.9
CANSAT80G0510 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-07 59.3 53 47.2
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-07 58.9 55 43.6
CANSAT21G1712 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-07 58.9 55 43.6
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 1.5e-07 58.9 55 43.6
Thhalv10015794m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.5e-07 58.9 56 41.1
Thhalv10023077m.g Eutrema salsugineum HOM05D000017 ORTHO05D014524 1.5e-07 58.9 56 41.1
Thhalv10023136m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.5e-07 58.9 56 41.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-07 58.9 58 37.9
MELO3C033090.2 Cucumis melo HOM05D000017 ORTHO05D000013 2.0e-07 58.5 31 87.1
THA.LOC104800036 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.0e-07 58.5 55 47.3
CANSAT25G1081 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.2 55 43.6
CANSAT35G0042 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.2 55 43.6
CANSAT56G2625 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.2 55 43.6
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 57.8 49 49.0
CANSAT64G3012 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-07 57.8 49 49.0
Thhalv10000682m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.3e-07 57.8 56 41.1
CANSAT64G1909 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-07 57.4 58 43.1
Oeu063036.1 Olea europaea HOM05D000017 ORTHO05D000013 4.4e-07 57.4 58 39.7
THA.LOC104817083 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.7e-07 57.0 55 45.5
TWI34G1566 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.7e-07 57.0 55 43.6
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-07 56.6 58 41.4
TWI18G0214 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.4e-07 56.6 55 43.6
Sopen10g005650 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-07 56.2 58 39.7
TWI53G0460 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.7e-07 56.2 52 46.2
Atru.chr3.2245 Acer truncatum HOM05D000017 ORTHO05D000013 1.3e-06 55.8 50 50.0
Oeu057224.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-06 55.8 53 45.3
BolC8t48408H Brassica oleracea HOM05D000017 ORTHO05D000013 1.7e-06 55.5 56 37.5
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 55.5 52 42.3
Thhalv10023101m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.7e-06 55.5 54 40.7
THA.LOC104808460 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.2e-06 55.1 57 43.9
RcHm_v2.0_Chr3g0453251 Rosa chinensis HOM05D000017 ORTHO05D000013 2.8e-06 54.7 57 42.1
RcHm_v2.0_Chr5g0042901 Rosa chinensis HOM05D000017 ORTHO05D000013 2.8e-06 54.7 57 42.1
THA.LOC104827520 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.8e-06 54.7 57 42.1
Atru.chr6.569 Acer truncatum HOM05D000017 ORTHO05D000013 3.7e-06 54.3 50 48.0
CANSAT21G2334 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-06 54.3 58 41.4
Oeu041534.1 Olea europaea HOM05D000017 ORTHO05D000013 3.7e-06 54.3 58 36.2
THA.LOC104808441 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.7e-06 54.3 55 41.8
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 4.8e-06 53.9 58 39.7
MELO3C029888.2 Cucumis melo HOM05D000017 ORTHO05D000013 4.8e-06 53.9 27 88.9
Oeu025849.1 Olea europaea HOM05D000017 ORTHO05D000013 4.8e-06 53.9 53 43.4
Oeu037080.1 Olea europaea HOM05D000017 ORTHO05D000013 4.8e-06 53.9 53 41.5
THA.LOC104825417 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.8e-06 53.9 55 40.0
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 53.9 52 46.2
TWI53G1561 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 53.9 52 46.2
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 54 40.7
Atru.chr10.1013 Acer truncatum HOM05D000004 ORTHO05D000002 6.3e-06 53.5 53 45.3
Atru.chr5.1934 Acer truncatum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 50 44.0
Atru.chr7.74 Acer truncatum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 50 46.0
CDE04G0238 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 53 39.6
Thhalv10012099m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 52 40.4
Nn5g27099 Nelumbo nucifera HOM05D000017 ORTHO05D000013 6.3e-06 53.5 48 45.8
Oeu004230.1 Olea europaea HOM05D000017 ORTHO05D000013 6.3e-06 53.5 56 37.5
PSO832G1947 Papaver somniferum HOM05D000017 ORTHO05D000013 6.3e-06 53.5 56 37.5
Atru.chr4.284 Acer truncatum HOM05D000017 ORTHO05D000013 8.2e-06 53.1 50 46.0
CSS0039161 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D001378 8.2e-06 53.1 55 40.0
CANSAT01G2166 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT11G1657 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT21G0541 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT21G0561 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 55 40.0
CANSAT21G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 55 40.0
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT35G2016 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT54G1422 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
CANSAT78G1514 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.1 49 46.9
Oeu027141.1 Olea europaea HOM05D000017 ORTHO05D000013 8.2e-06 53.1 53 41.5
Oeu057481.1 Olea europaea HOM05D000017 ORTHO05D000013 8.2e-06 53.1 56 37.5
Oeu062179.1 Olea europaea HOM05D000017 ORTHO05D000013 8.2e-06 53.1 56 37.5
Sabra18G0104600 Salix brachista HOM05D000017 ORTHO05D000013 8.2e-06 53.1 53 43.4


User provided reference genes

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