Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027432.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.2e-220 768.1 380 100.0
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.1e-155 552.7 529 61.6
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.9e-106 388.3 366 61.7
MELO3C030915.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.5e-104 381.7 351 63.5
MELO3C034500.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.3e-96 357.5 342 61.7
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 5.5e-79 298.9 346 54.0
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-77 294.3 185 78.9
MELO3C029153.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.2e-77 292.4 202 75.2
MELO3C029126.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.4e-76 289.7 278 60.8
MELO3C031851.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.0e-73 280.4 183 79.8
MELO3C034519.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.8e-72 276.2 232 64.7
MELO3C029556.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-71 274.6 284 58.8
MELO3C032765.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.7e-67 259.6 257 60.3
MELO3C000067.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.9e-65 252.3 267 58.8
MELO3C029129.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.5e-63 245.0 166 75.3
CsaV3_3G020500 Cucumis sativus L. HOM05D007110 ORTHO05D000233 3.4e-60 236.5 222 59.9
MELO3C035129.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.1e-58 231.5 452 39.6
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.0e-57 227.3 307 48.9
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.1e-53 214.9 517 35.0
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.6e-46 191.0 704 25.7
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.2e-46 189.1 704 25.6
MELO3C034440.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.1e-45 186.8 186 57.5
MELO3C030140.2 Cucumis melo HOM05D007110 ORTHO05D000592 9.9e-44 181.8 275 46.5
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 4.9e-43 179.5 656 25.9
MELO3C033304.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.3e-40 170.6 357 37.8
MELO3C028456.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.5e-39 167.2 117 77.8
MELO3C030421.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.6e-38 164.5 94 88.3
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.4e-37 161.4 181 53.6
MELO3C029607.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.6e-36 157.1 176 53.4
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.7e-33 147.1 208 44.2
ClCG05G015020 Citrullus lanatus HOM05D007110 ORTHO05D000592 8.1e-30 135.6 238 37.8
MELO3C028541.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.0e-29 133.3 83 79.5
MELO3C027932.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.4e-27 125.9 67 89.6
MELO3C034911.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.4e-27 125.6 157 48.4
CsaV3_3G028110 Cucumis sativus L. HOM05D007110 ORTHO05D000592 7.8e-25 119.0 113 57.5
CsaV3_7G018420 Cucumis sativus L. HOM05D007110 ORTHO05D000233 1.4e-21 108.2 200 42.5
ClCG11G007640 Citrullus lanatus HOM05D007110 ORTHO05D000592 9.0e-21 105.5 260 34.2
MELO3C034460.2 Cucumis melo HOM05D000107 ORTHO05D000062 3.4e-20 103.6 168 45.8
Sed0019136 Sechium edule HOM05D000539 ORTHO05D000233 3.4e-20 103.6 477 23.9
Sed0016258 Sechium edule HOM05D000539 ORTHO05D000233 5.8e-20 102.8 475 25.1
MELO3C028426.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.9e-19 99.8 48 91.7
Sed0019036 Sechium edule HOM05D000539 ORTHO05D000592 2.7e-17 94.0 449 23.2
ClCG03G012240 Citrullus lanatus HOM05D016206 ORTHO05D000233 5.6e-15 86.3 333 25.2
MELO3C034371.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.3e-14 85.1 91 41.8
MELO3C027818.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-13 81.3 79 54.4
MELO3C030224.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-13 81.3 78 55.1
ClCG09G008820 Citrullus lanatus HOM05D000539 ORTHO05D000233 3.1e-13 80.5 110 41.8
ClCG01G011790 Citrullus lanatus HOM05D000539 ORTHO05D000233 5.3e-13 79.7 71 53.5
MELO3C027954.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.0e-11 75.5 53 71.7
CsaV3_6G018640 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.3e-11 75.1 112 32.1
MELO3C028238.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.5e-11 72.8 76 53.9
MELO3C033540.2 Cucumis melo HOM05D007110 ORTHO05D000592 8.4e-11 72.4 123 43.1
ClCG02G006470 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.1e-10 72.0 115 36.5
Ciclev10013461m.g Citrus clementina HOM05D000616 ORTHO05D000233 1.4e-10 71.6 126 30.2
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.9e-10 71.2 90 36.7
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 1.9e-10 71.2 111 37.8
Sed0009359 Sechium edule HOM05D000107 ORTHO05D000062 2.5e-10 70.9 95 33.7
MELO3C030669.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.2e-10 70.1 148 29.1
MELO3C029479.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.5e-10 69.7 333 22.8
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.2e-09 68.6 90 35.6
MELO3C033845.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.2e-09 68.6 108 31.5
PSO455G0142 Papaver somniferum HOM05D000539 ORTHO05D000233 1.2e-09 68.6 89 31.5
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 1.2e-09 68.6 110 34.5
PSO170G4584 Papaver somniferum HOM05D000539 ORTHO05D000233 1.6e-09 68.2 89 31.5
MELO3C032706.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.1e-09 67.8 91 35.2
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 2.1e-09 67.8 124 31.5
Sed0012653 Sechium edule HOM05D007110 ORTHO05D000592 2.1e-09 67.8 187 27.3
SalBow6G5433 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-09 67.4 189 25.4
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 6.0e-09 66.2 103 28.2
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 6.0e-09 66.2 96 34.4
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.9e-09 65.9 90 35.6
MELO3C027188.2 Cucumis melo HOM05D000583 ORTHO05D000233 1.0e-08 65.5 92 34.8
MELO3C027955.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.0e-08 65.5 76 38.2
MELO3C033323.2 Cucumis melo HOM05D000616 ORTHO05D000233 1.0e-08 65.5 71 45.1
RcHm_v2.0_Chr1g0325021 Rosa chinensis HOM05D000539 ORTHO05D000233 1.0e-08 65.5 110 30.9
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 1.3e-08 65.1 103 28.2
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 1.8e-08 64.7 103 31.1
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 1.8e-08 64.7 141 28.4
MELO3C030857.2 Cucumis melo HOM05D000539 ORTHO05D000592 2.3e-08 64.3 120 30.0
Ciclev10003872m.g Citrus clementina HOM05D002644 ORTHO05D000233 3.9e-08 63.5 90 28.9
MELO3C029326.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.9e-08 63.5 69 42.0
Ciclev10003585m.g Citrus clementina HOM05D000616 ORTHO05D000233 5.1e-08 63.2 72 36.1
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-08 63.2 88 34.1
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 5.1e-08 63.2 88 34.1
Sed0010052 Sechium edule HOM05D000539 ORTHO05D000233 5.1e-08 63.2 77 36.4
ClCG02G009460 Citrullus lanatus HOM05D000616 ORTHO05D000233 6.7e-08 62.8 134 28.4
Ciclev10017763m.g Citrus clementina HOM05D000616 ORTHO05D000233 6.7e-08 62.8 71 36.6
Ciclev10033571m.g Citrus clementina HOM05D000616 ORTHO05D000233 6.7e-08 62.8 71 36.6
CsaV3_4G008540 Cucumis sativus L. HOM05D000539 ORTHO05D000233 6.7e-08 62.8 77 35.1
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 6.7e-08 62.8 76 38.2
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 6.7e-08 62.8 100 30.0
FvH4_3g23522 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-07 62.0 100 32.0
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-07 62.0 95 33.7
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-07 62.0 100 30.0
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 1.1e-07 62.0 145 32.4
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 1.5e-07 61.6 100 32.0
RcHm_v2.0_Chr3g0482281 Rosa chinensis HOM05D002644 ORTHO05D000233 1.5e-07 61.6 92 32.6
PSO724G0149 Papaver somniferum HOM05D000616 ORTHO05D000233 1.9e-07 61.2 76 38.2
Sed0019768 Sechium edule HOM05D000539 ORTHO05D000592 1.9e-07 61.2 110 29.1
MELO3C032426.2 Cucumis melo HOM05D000616 ORTHO05D000233 3.3e-07 60.5 67 41.8
CsaV3_5G020430 Cucumis sativus L. HOM05D000539 ORTHO05D000592 3.3e-07 60.5 111 30.6
DCAR_031676 Daucus carota HOM05D000539 ORTHO05D000233 3.3e-07 60.5 71 40.8
RcHm_v2.0_Chr1g0340601 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-07 60.5 80 35.0
RcHm_v2.0_Chr4g0417951 Rosa chinensis HOM05D000539 ORTHO05D000592 3.3e-07 60.5 97 32.0
AUR62026574 Chenopodium quinoa HOM05D002644 ORTHO05D000233 4.3e-07 60.1 132 32.6
Ciclev10007052m.g Citrus clementina HOM05D000616 ORTHO05D000233 5.7e-07 59.7 89 32.6
Ciclev10024574m.g Citrus clementina HOM05D000616 ORTHO05D000233 5.7e-07 59.7 89 33.7
MELO3C031515.2 Cucumis melo HOM05D000539 ORTHO05D000592 5.7e-07 59.7 58 44.8
FvH4_4g15803 Fragaria vesca HOM05D000539 ORTHO05D000233 5.7e-07 59.7 77 36.4
RcHm_v2.0_Chr2g0123111 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-07 59.7 99 31.3
RcHm_v2.0_Chr3g0481681 Rosa chinensis HOM05D000539 ORTHO05D000233 5.7e-07 59.7 67 40.3
Ciclev10033599m.g Citrus clementina HOM05D000616 ORTHO05D000233 7.4e-07 59.3 89 32.6
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.4e-07 59.3 96 31.2
PSO339G6242 Papaver somniferum HOM05D008526 ORTHO05D010380 7.4e-07 59.3 106 30.2
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.4e-07 59.3 71 35.2
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 7.4e-07 59.3 101 32.7
Ciclev10003324m.g Citrus clementina HOM05D000616 ORTHO05D000233 9.6e-07 58.9 77 35.1
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 9.6e-07 58.9 97 30.9
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 9.6e-07 58.9 97 30.9
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.3e-06 58.5 68 35.3
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 1.6e-06 58.2 99 29.3
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-06 58.2 258 23.3
GSVIVG01027893001 Vitis vinifera HOM05D000616 ORTHO05D000233 1.6e-06 58.2 71 33.8
Sed0020810 Sechium edule HOM05D000539 ORTHO05D000592 2.1e-06 57.8 94 30.9
GSVIVG01006109001 Vitis vinifera HOM05D000616 ORTHO05D000233 2.1e-06 57.8 71 33.8
GSVIVG01007627001 Vitis vinifera HOM05D000616 ORTHO05D000233 2.1e-06 57.8 71 33.8
GSVIVG01008009001 Vitis vinifera HOM05D000616 ORTHO05D000233 2.1e-06 57.8 71 33.8
GSVIVG01026840001 Vitis vinifera HOM05D000616 ORTHO05D000233 2.1e-06 57.8 71 33.8
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 2.8e-06 57.4 89 30.3
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.8e-06 57.4 71 32.4
GSVIVG01014009001 Vitis vinifera HOM05D000616 ORTHO05D000233 2.8e-06 57.4 71 33.8
RcHm_v2.0_Chr2g0102081 Rosa chinensis HOM05D000539 ORTHO05D000233 3.7e-06 57.0 85 30.6
SHI14858 Sapria himalayana HOM05D000616 ORTHO05D000233 3.7e-06 57.0 113 28.3
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 4.8e-06 56.6 68 33.8
PSO478G4591 Papaver somniferum HOM05D008526 ORTHO05D010380 4.8e-06 56.6 113 26.5
GSVIVG01005143001 Vitis vinifera HOM05D000616 ORTHO05D000233 4.8e-06 56.6 71 33.8
ClCG01G011930 Citrullus lanatus HOM05D016206 ORTHO05D000233 6.2e-06 56.2 126 29.4
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 6.2e-06 56.2 153 30.1
Hma1.2p1_0096F.1_g047665 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 6.2e-06 56.2 68 33.8
Hma1.2p1_0409F.1_g146975 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 6.2e-06 56.2 68 33.8
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 6.2e-06 56.2 100 28.0
Ca_06038_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.2e-06 55.8 372 22.3
MELO3C029587.2 Cucumis melo HOM05D000616 ORTHO05D000233 8.2e-06 55.8 125 27.2
Hma1.2p1_0473F.1_g160240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 8.2e-06 55.8 68 33.8
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 8.2e-06 55.8 78 35.9
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 8.2e-06 55.8 96 29.2


User provided reference genes

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