Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 8.5e-51 203.4 102 100.0
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 3.3e-47 191.4 102 93.1
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 6.5e-43 177.2 100 88.0
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 7.0e-37 157.1 98 80.6
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 4.5e-20 101.3 94 56.4
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 7.8e-20 100.5 99 53.5
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 6.6e-19 97.4 93 52.7
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 8.6e-19 97.1 99 53.5
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 1.5e-18 96.3 98 52.0
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 2.8e-17 92.0 90 53.3
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.6e-15 85.5 91 49.5
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 2.6e-15 85.5 91 49.5
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 3.4e-15 85.1 100 46.0
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 9.8e-15 83.6 90 47.8
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 1.3e-14 83.2 91 49.5
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 2.9e-14 82.0 93 44.1
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 2.9e-14 82.0 93 45.2
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 3.7e-14 81.6 99 44.4
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 1.8e-13 79.3 91 48.4
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 1.8e-13 79.3 93 45.2
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 1.8e-13 79.3 101 43.6
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 2.4e-13 79.0 93 41.9
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 2.4e-13 79.0 93 44.1
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 4.1e-13 78.2 96 44.8
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 5.4e-13 77.8 58 65.5
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 5.4e-13 77.8 74 54.1
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 9.2e-13 77.0 93 46.2
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 9.2e-13 77.0 93 43.0
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 1.2e-12 76.6 93 43.0
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 1.6e-12 76.3 93 45.2
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 2.0e-12 75.9 102 44.1
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 2.0e-12 75.9 102 44.1
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 2.7e-12 75.5 93 45.2
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 2.7e-12 75.5 95 41.1
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 2.7e-12 75.5 98 41.8
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 4.6e-12 74.7 96 42.7
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 4.6e-12 74.7 66 56.1
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 4.6e-12 74.7 93 45.2
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 6.0e-12 74.3 65 58.5
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 6.0e-12 74.3 70 52.9
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 1.0e-11 73.6 79 49.4
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 1.0e-11 73.6 66 54.5
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 1.7e-11 72.8 84 46.4
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 1.7e-11 72.8 84 46.4
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 1.7e-11 72.8 96 41.7
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.0e-11 72.0 86 43.0
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 3.0e-11 72.0 88 45.5
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 5.0e-11 71.2 94 44.7
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 1.5e-10 69.7 101 36.6
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 1.5e-10 69.7 101 36.6
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 2.5e-10 68.9 66 50.0
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 2.5e-10 68.9 66 50.0
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 3.3e-10 68.6 65 52.3
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 4.3e-10 68.2 70 50.0
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 9.5e-10 67.0 65 50.8
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 1.2e-09 66.6 65 52.3
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 1.2e-09 66.6 76 47.4
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 2.1e-09 65.9 70 51.4
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.8e-09 65.5 86 44.2
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 2.8e-09 65.5 84 42.9
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 4.7e-09 64.7 84 44.0
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 6.2e-09 64.3 84 44.0
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 1.1e-08 63.5 69 47.8
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 1.4e-08 63.2 66 47.0
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 2.3e-08 62.4 84 42.9
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 2.3e-08 62.4 84 42.9
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 7.5e-07 57.4 57 52.6
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 1.3e-06 56.6 91 39.6
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 2.9e-06 55.5 97 36.1
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 4.9e-06 54.7 94 39.4
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 8.3e-06 53.9 78 34.6


User provided reference genes

Program Settings