Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027262.2 Cucumis melo HOM05D005793 ORTHO05D010329 4.9e-53 210.7 94 100.0
MELO3C027170.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.1e-47 193.0 93 93.5
MELO3C027473.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.5e-46 189.1 93 91.4
MELO3C027563.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.0e-46 188.7 89 94.4
MELO3C013661.2 Cucumis melo HOM05D005793 ORTHO05D010329 3.8e-45 184.5 86 95.3
MELO3C033709.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.5e-41 171.8 80 95.0
MELO3C031989.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.7e-34 147.1 72 88.9
MELO3C027464.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.8e-31 139.0 68 94.1
MELO3C004088.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.0e-30 135.6 61 96.7
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 3.4e-30 134.8 87 62.1
MELO3C031787.2 Cucumis melo HOM05D005793 ORTHO05D010329 4.5e-30 134.4 61 95.1
MELO3C029856.2 Cucumis melo HOM05D005793 ORTHO05D010329 9.9e-30 133.3 61 93.4
MELO3C032973.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.9e-29 131.7 61 93.4
MELO3C032534.2 Cucumis melo HOM05D005793 ORTHO05D010329 8.4e-29 130.2 61 95.1
MELO3C034156.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.1e-28 129.8 66 86.4
MELO3C035366.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.5e-28 127.5 60 95.0
MELO3C033174.2 Cucumis melo HOM05D005793 ORTHO05D010329 7.1e-28 127.1 61 90.2
MELO3C033588.2 Cucumis melo HOM05D005793 ORTHO05D010329 7.1e-28 127.1 61 91.8
MELO3C031903.2 Cucumis melo HOM05D005793 ORTHO05D010329 3.5e-27 124.8 61 91.8
MELO3C027523.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.3e-26 122.1 61 85.2
MELO3C031292.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.1e-26 120.9 61 86.9
MELO3C034108.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.1e-26 120.9 61 88.5
MELO3C027291.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.9e-25 119.0 66 81.8
MELO3C027451.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.3e-24 116.3 54 94.4
MELO3C028870.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.6e-24 115.9 60 86.7
MELO3C035467.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.0e-21 106.7 53 88.7
MELO3C033582.2 Cucumis melo HOM05D005793 ORTHO05D010329 3.8e-21 104.8 53 86.8
MELO3C030539.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.9e-20 102.4 53 84.9
MELO3C031889.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.7e-18 94.0 44 90.9
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 1.5e-17 92.8 77 53.2
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 1.5e-17 92.8 82 46.3
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 1.5e-17 92.8 82 46.3
Thecc.10G091900 Theobroma cacao HOM05D002881 ORTHO05D010329 7.4e-17 90.5 82 43.9
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 9.7e-17 90.1 86 43.0
MELO3C032354.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.1e-15 86.7 49 77.6
Thecc.02G279500 Theobroma cacao HOM05D002881 ORTHO05D010329 4.1e-15 84.7 82 42.7
MELO3C034087.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.3e-15 84.3 55 72.7
Thecc.03G121800 Theobroma cacao HOM05D002881 ORTHO05D002983 5.3e-15 84.3 85 41.2
Thecc.02G249500 Theobroma cacao HOM05D002881 ORTHO05D010329 1.2e-14 83.2 72 47.2
Gorai.002G202700 Gossypium raimondii HOM05D002881 ORTHO05D002983 4.5e-14 81.3 77 45.5
Thecc.03G050000 Theobroma cacao HOM05D002881 ORTHO05D010329 4.5e-14 81.3 62 50.0
CsaV3_5G027550 Cucumis sativus L. HOM05D005793 ORTHO05D010329 2.2e-13 79.0 68 42.6
MELO3C033144.2 Cucumis melo HOM05D005793 ORTHO05D010329 3.8e-13 78.2 76 47.4
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 5.0e-13 77.8 83 43.4
MELO3C035347.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.5e-13 77.4 49 75.5
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.4e-12 76.3 83 42.2
MELO3C035329.2 Cucumis melo HOM05D005793 ORTHO05D010329 7.2e-12 73.9 45 77.8
TWI53G0826 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 9.4e-12 73.6 90 36.7
MELO3C030382.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.6e-11 72.8 36 83.3
CAN.G82.5 Capsicum annuum HOM05D025468 ORTHO05D019542 7.9e-11 70.5 81 43.2
CAN.G1.9 Capsicum annuum HOM05D025468 ORTHO05D019542 1.0e-10 70.1 81 42.0
TWI56G1458 Tripterygium wilfordii HOM05D036929 ORTHO05D010329 1.0e-10 70.1 85 37.6
COL.COLO4_08519 Corchorus olitorius HOM05D035067 ORTHO05D010329 2.3e-10 68.9 79 40.5
COL.COLO4_37634 Corchorus olitorius HOM05D035067 ORTHO05D010329 3.9e-10 68.2 79 40.5
MELO3C029902.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.7e-10 67.4 33 84.8
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 8.8e-10 67.0 89 33.7
MELO3C034708.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.5e-09 66.2 32 84.4
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 2.0e-09 65.9 89 32.6
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-09 65.1 89 32.6
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-09 65.1 89 32.6
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-09 64.3 89 32.6
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-09 64.3 89 32.6
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 5.7e-09 64.3 89 32.6
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 5.7e-09 64.3 89 32.6
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 9.7e-09 63.5 89 31.5
MELO3C029812.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.3e-08 63.2 32 87.5
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-08 63.2 89 31.5
MELO3C032573.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.7e-08 62.8 30 86.7
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 3.7e-08 61.6 89 31.5
MELO3C030384.2 Cucumis melo HOM05D005793 ORTHO05D010329 4.8e-08 61.2 27 92.6
MELO3C030413.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.3e-08 60.8 30 86.7
MELO3C032577.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.3e-08 60.8 26 92.3
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 8.2e-08 60.5 79 34.2
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-07 59.3 89 30.3
TPR.G23480 Trifolium pratense HOM05D002881 ORTHO05D002983 5.3e-07 57.8 59 42.4
Medtr6g072130 Medicago truncatula HOM05D002881 ORTHO05D002983 6.9e-07 57.4 78 37.2
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 9.1e-07 57.0 81 32.1
TWI38G2240 Tripterygium wilfordii HOM05D036929 ORTHO05D010329 9.1e-07 57.0 62 40.3
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 1.5e-06 56.2 71 35.2
Medtr3g051650 Medicago truncatula HOM05D002881 ORTHO05D002983 2.6e-06 55.5 83 31.3
Medtr5g080530 Medicago truncatula HOM05D002881 ORTHO05D002983 2.6e-06 55.5 83 31.3
Medtr7g006680 Medicago truncatula HOM05D002881 ORTHO05D002983 2.6e-06 55.5 83 31.3
Medtr7g046110 Medicago truncatula HOM05D002881 ORTHO05D002983 2.6e-06 55.5 83 31.3
Ca_04842_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 3.4e-06 55.1 73 34.2
Ca_19544_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 3.4e-06 55.1 73 34.2
Medtr3g091160 Medicago truncatula HOM05D002881 ORTHO05D002983 3.4e-06 55.1 83 31.3
Ca_23456_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 5.9e-06 54.3 73 34.2
Medtr0866s0010 Medicago truncatula HOM05D002881 ORTHO05D002983 5.9e-06 54.3 88 31.8
Medtr6g084020 Medicago truncatula HOM05D002881 ORTHO05D002983 5.9e-06 54.3 73 38.4
TPR.G35764 Trifolium pratense HOM05D002881 ORTHO05D002983 5.9e-06 54.3 55 40.0
TWI34G2007 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.9e-06 54.3 54 44.4
Ca_05169_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 7.7e-06 53.9 73 34.2
Medtr0124s0070 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 53.9 67 37.3
Medtr2g049380 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 53.9 82 30.5
Medtr4g040010 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 53.9 67 37.3
Medtr5g084310 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 53.9 83 28.9
Medtr5g085650 Medicago truncatula HOM05D002881 ORTHO05D002983 7.7e-06 53.9 83 28.9


User provided reference genes

Program Settings