Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027008.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.5e-39 165.6 80 100.0
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.7e-25 119.0 73 79.5
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 4.8e-25 117.5 73 78.1
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.4e-23 111.3 73 75.3
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 6.5e-22 107.1 73 72.6
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 2.5e-21 105.1 73 69.9
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 7.2e-21 103.6 73 67.1
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 9.4e-21 103.2 73 68.5
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 1.6e-20 102.4 73 67.1
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.6e-20 102.4 81 64.2
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 3.6e-20 101.3 73 65.8
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 3.6e-20 101.3 82 63.4
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 3.6e-20 101.3 73 65.8
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 4.7e-20 100.9 73 67.1
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 4.7e-20 100.9 73 67.1
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 6.1e-20 100.5 73 64.4
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 6.1e-20 100.5 73 65.8
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 6.1e-20 100.5 73 65.8
Peaxi162Scf00444g00717 Petunia axillaris HOM05D001607 ORTHO05D001893 6.1e-20 100.5 73 65.8
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 6.1e-20 100.5 81 64.2
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 7.9e-20 100.1 73 65.8
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 7.9e-20 100.1 73 69.9
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.0e-19 99.8 72 69.4
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 1.0e-19 99.8 73 67.1
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 1.0e-19 99.8 73 67.1
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 1.4e-19 99.4 73 65.8
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.4e-19 99.4 73 65.8
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-19 99.4 72 68.1
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 1.4e-19 99.4 72 68.1
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.8e-19 99.0 73 65.8
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 2.3e-19 98.6 82 61.0
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.3e-19 98.6 73 64.4
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 2.3e-19 98.6 82 61.0
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 2.3e-19 98.6 73 64.4
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 64.4
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 65.8
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 65.8
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 63.0
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 64.4
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 63.0
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 3.0e-19 98.2 73 63.0
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 3.9e-19 97.8 73 65.8
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 3.9e-19 97.8 73 64.4
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.9e-19 97.8 73 63.0
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 5.1e-19 97.4 72 66.7
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 5.1e-19 97.4 73 61.6
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 5.1e-19 97.4 81 61.7
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 5.1e-19 97.4 73 65.8
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 6.7e-19 97.1 72 66.7
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 6.7e-19 97.1 73 61.6
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 6.7e-19 97.1 72 66.7
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 6.7e-19 97.1 72 66.7
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 6.7e-19 97.1 72 66.7
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 6.7e-19 97.1 72 65.3
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-19 96.7 72 66.7
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 8.8e-19 96.7 82 59.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 8.8e-19 96.7 73 63.0
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.8e-19 96.7 71 67.6
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 8.8e-19 96.7 73 63.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 8.8e-19 96.7 72 63.9
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 8.8e-19 96.7 73 63.0
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 8.8e-19 96.7 73 64.4
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 8.8e-19 96.7 73 64.4
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 1.1e-18 96.3 73 61.6
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-18 96.3 73 65.8
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-18 96.3 73 65.8
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-18 96.3 73 65.8
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 1.1e-18 96.3 73 61.6
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.1e-18 96.3 72 63.9
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.5e-18 95.9 73 61.6
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.5e-18 95.9 73 61.6
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.5e-18 95.9 73 64.4
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 1.5e-18 95.9 73 63.0
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 65.3
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 65.3
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 65.3
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 65.3
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 65.3
Glyma.09G137500 Glycine max HOM05D001607 ORTHO05D001893 2.0e-18 95.5 82 58.5
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 2.0e-18 95.5 72 63.9
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.0e-18 95.5 73 63.0
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 2.6e-18 95.1 72 65.3
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 63.0
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 63.0
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 63.0
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 63.0
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 63.0
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.6e-18 95.1 71 66.2
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 60.3
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 60.3
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 2.6e-18 95.1 73 61.6
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 2.6e-18 95.1 77 58.4
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.3e-18 94.7 73 63.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 3.3e-18 94.7 73 63.0
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 4.4e-18 94.4 72 63.9
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.4e-18 94.4 73 61.6
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 4.4e-18 94.4 73 61.6
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.4e-18 94.4 73 63.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 4.4e-18 94.4 72 65.3
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 4.4e-18 94.4 73 61.6
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 4.4e-18 94.4 73 63.0
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 5.7e-18 94.0 73 61.6
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 5.7e-18 94.0 72 65.3
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 7.4e-18 93.6 73 61.6
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 9.7e-18 93.2 73 61.6
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 9.7e-18 93.2 73 61.6
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 9.7e-18 93.2 72 63.9
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 9.7e-18 93.2 73 61.6
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.3e-17 92.8 73 60.3
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.3e-17 92.8 73 60.3
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 2.2e-17 92.0 73 60.3
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.8e-17 91.7 72 62.5
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 3.7e-17 91.3 77 57.1
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 6.3e-17 90.5 73 58.9
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 8.2e-17 90.1 73 58.9
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 8.2e-17 90.1 72 59.7
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.1e-16 89.7 73 57.5
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.1e-16 89.7 72 58.3
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 7.0e-16 87.0 72 58.3
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.2e-15 86.3 71 57.7
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 1.2e-15 86.3 73 57.5
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.3e-14 82.8 72 55.6
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 3.8e-14 81.3 72 54.2
CSS0037491 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 2.5e-13 78.6 56 69.6
Ca_05504_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.2e-13 78.2 56 67.9
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 2.7e-12 75.1 55 67.3
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 1.0e-11 73.2 64 54.7
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 1.1e-10 69.7 76 46.1
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.1e-10 69.7 73 47.9
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 7.5e-10 67.0 64 50.0
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 4.8e-09 64.3 62 48.4


User provided reference genes

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