Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.9e-93 344.7 170 100.0
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 4.5e-81 304.7 156 96.2
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.5e-76 289.7 156 90.4
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.8e-61 239.6 153 77.8
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.4e-60 235.3 156 73.1
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 4.9e-59 231.5 156 70.5
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 5.4e-58 228.0 156 66.7
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.2e-57 226.9 156 69.9
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.3e-56 222.6 156 68.6
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.3e-56 222.6 159 69.8
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 6.6e-56 221.1 157 70.1
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.1e-55 220.3 168 64.9
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.1e-55 220.3 159 68.6
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 2.5e-55 219.2 160 67.5
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 3.3e-55 218.8 166 66.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 4.3e-55 218.4 156 67.9
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.6e-55 218.0 156 67.3
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 1.2e-54 216.9 161 65.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 8.0e-54 214.2 159 68.6
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.8e-53 213.0 162 64.2
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.8e-53 213.0 156 66.0
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 6.8e-53 211.1 156 66.0
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 3.4e-52 208.8 169 62.1
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.7e-52 208.0 168 60.7
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 5.7e-52 208.0 156 66.7
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.2e-51 206.1 160 62.5
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 2.9e-51 205.7 148 66.9
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 3.7e-51 205.3 156 64.7
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 6.4e-51 204.5 156 65.4
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.1e-50 203.8 157 66.2
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 2.0e-49 199.5 156 63.5
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 3.0e-48 195.7 156 62.8
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 3.9e-48 195.3 156 61.5
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.0e-48 194.9 201 52.2
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 8.6e-48 194.1 156 61.5
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.9e-47 193.0 165 58.8
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.5e-47 192.6 159 62.3
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.3e-47 192.2 159 62.3
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 4.3e-47 191.8 155 60.0
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.1e-46 189.5 165 58.2
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 2.8e-46 189.1 156 62.2
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.5e-44 183.3 167 55.7
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 7.5e-44 181.0 156 60.3
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.3e-43 180.3 158 55.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 4.9e-43 178.3 158 55.1
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 6.4e-43 177.9 155 58.7
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 8.3e-43 177.6 171 52.0
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.1e-42 177.2 164 57.9
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.4e-42 176.8 156 57.1
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.4e-42 176.8 166 57.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.4e-42 176.8 155 54.8
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 1.9e-42 176.4 126 66.7
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.9e-42 176.4 167 57.5
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.2e-42 175.6 165 56.4
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 4.1e-42 175.3 156 58.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 5.4e-42 174.9 190 51.6
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 5.4e-42 174.9 153 60.8
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 7.0e-42 174.5 150 59.3
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 7.0e-42 174.5 150 59.3
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 7.0e-42 174.5 168 56.5
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 9.2e-42 174.1 166 53.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 3.5e-41 172.2 154 54.5
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.0e-40 170.6 146 58.2
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 1.7e-40 169.9 166 51.8
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 2.3e-40 169.5 153 55.6
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 3.9e-40 168.7 154 54.5
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 3.9e-40 168.7 154 54.5
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 3.9e-40 168.7 151 55.0
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.1e-39 167.2 151 54.3
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.1e-39 167.2 154 53.9
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 1.1e-39 167.2 154 53.9
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.1e-39 167.2 154 53.9
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.1e-39 167.2 151 55.6
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.3e-39 165.2 151 54.3
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 7.3e-39 164.5 152 55.3
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.1e-38 162.9 159 52.2
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.2e-36 157.1 166 48.2
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.5e-36 156.8 155 51.6
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-36 156.0 155 51.6
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 9.8e-36 154.1 158 50.0
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 2.9e-35 152.5 149 49.7
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 8.3e-35 151.0 162 50.0
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.2e-33 147.1 160 48.1
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-33 147.1 115 64.3
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 4.3e-31 138.7 154 43.5
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 7.3e-31 137.9 150 44.7
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 9.5e-31 137.5 156 44.2
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.2e-30 137.1 136 52.2
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.6e-30 135.6 154 43.5
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 6.2e-30 134.8 137 49.6
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.9e-26 123.2 103 58.3
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 3.2e-26 122.5 153 43.1
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 4.6e-25 118.6 80 70.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.3e-24 117.1 104 52.9
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.1e-23 114.0 120 53.3
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.6e-22 110.2 115 49.6
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 5.2e-21 105.1 99 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 8.9e-21 104.4 129 38.8
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 5.8e-20 101.7 86 59.3
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.0e-16 89.4 77 55.8
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 7.1e-10 68.2 50 66.0
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.1e-07 60.8 49 57.1
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 1.3e-06 57.4 36 69.4


User provided reference genes

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