Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.4e-132 474.6 229 100.0
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.9e-50 203.4 140 75.0
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 2.5e-50 203.0 140 72.9
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.5e-50 201.8 140 75.0
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 4.1e-45 185.7 139 64.7
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 3.9e-43 179.1 142 64.1
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.5e-42 176.4 140 64.3
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.3e-42 176.0 140 63.6
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 4.3e-42 175.6 140 63.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.3e-42 174.9 142 61.3
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.3e-42 174.9 146 60.3
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 9.5e-42 174.5 150 58.7
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 9.5e-42 174.5 141 61.0
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.6e-41 173.7 140 64.3
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.6e-41 173.7 146 60.3
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.1e-41 173.3 141 61.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.1e-41 171.8 146 59.6
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 6.1e-41 171.8 141 61.0
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 6.1e-41 171.8 157 57.3
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 6.1e-41 171.8 142 62.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.0e-40 171.0 141 61.7
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.8e-40 170.2 141 63.1
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.8e-40 170.2 141 61.0
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.3e-40 169.9 141 62.4
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.3e-40 169.9 142 60.6
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.1e-40 169.5 141 61.0
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.1e-40 169.5 148 60.1
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 3.1e-40 169.5 140 62.9
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.1e-40 169.5 142 61.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.1e-40 169.5 142 61.3
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 3.1e-40 169.5 140 62.1
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 3.1e-40 169.5 140 62.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.1e-40 169.5 140 62.1
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 4.0e-40 169.1 164 54.3
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 6.8e-40 168.3 140 59.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 8.9e-40 167.9 141 61.7
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-39 167.5 140 60.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.2e-39 167.5 140 60.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.2e-39 167.5 141 60.3
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.4e-39 166.0 140 62.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.4e-39 165.6 140 59.3
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 4.4e-39 165.6 144 59.0
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 5.8e-39 165.2 140 60.0
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 5.8e-39 165.2 140 60.0
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 9.8e-39 164.5 140 57.9
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 9.8e-39 164.5 140 62.1
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.3e-38 164.1 140 60.0
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.7e-38 163.7 140 58.6
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 2.2e-38 163.3 139 59.0
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 2.2e-38 163.3 140 60.0
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.9e-38 162.9 140 58.6
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 3.7e-38 162.5 142 59.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.7e-38 162.5 140 59.3
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 3.7e-38 162.5 140 60.7
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 6.4e-38 161.8 140 57.1
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 8.3e-38 161.4 140 59.3
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 8.3e-38 161.4 163 50.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 8.3e-38 161.4 140 58.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.1e-37 161.0 142 57.0
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-37 160.6 150 56.7
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.4e-37 160.6 140 59.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.4e-37 159.8 140 56.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.4e-37 159.8 156 55.1
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.2e-37 159.5 150 56.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.2e-37 159.5 150 56.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.2e-37 159.5 140 56.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 4.1e-37 159.1 168 50.6
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 5.4e-37 158.7 140 58.6
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 5.4e-37 158.7 140 59.3
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 5.4e-37 158.7 140 56.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 7.0e-37 158.3 140 58.6
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 7.0e-37 158.3 140 58.6
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 7.0e-37 158.3 140 58.6
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 7.0e-37 158.3 140 57.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 7.0e-37 158.3 140 58.6
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 9.2e-37 157.9 140 58.6
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.2e-37 157.9 140 56.4
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.2e-36 157.5 140 57.9
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.6e-36 157.1 147 59.2
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.7e-36 156.4 140 55.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 2.7e-36 156.4 140 55.7
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 4.6e-36 155.6 140 55.7
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 6.0e-36 155.2 140 57.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 6.0e-36 155.2 140 58.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 7.8e-36 154.8 164 52.4
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 3.0e-35 152.9 140 54.3
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 3.0e-35 152.9 140 54.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 3.9e-35 152.5 140 57.1
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.9e-34 150.2 140 55.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.5e-34 149.8 140 57.1
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.5e-34 149.8 139 53.2
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 9.5e-34 147.9 113 63.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 6.2e-33 145.2 140 55.0
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 8.0e-33 144.8 140 54.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 5.2e-32 142.1 140 52.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 8.9e-32 141.4 140 52.1
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 8.9e-32 141.4 132 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.5e-31 140.6 140 52.1
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 9.8e-31 137.9 140 50.7
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 7.1e-29 131.7 165 45.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 7.8e-28 128.3 75 74.7
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.9e-27 125.9 138 46.4
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.6e-25 120.6 117 54.7
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.6e-25 120.6 117 54.7
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 8.1e-25 118.2 71 77.5
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 4.0e-24 115.9 116 54.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 1.3e-22 110.9 143 42.7
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.6e-20 104.0 117 50.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.7e-19 100.5 152 38.2
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.3e-19 100.1 186 32.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.3e-18 95.1 114 49.1
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.1e-17 93.6 114 45.6
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.0e-15 87.0 97 49.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.4e-13 79.0 96 53.1
MELO3C029183.2 Cucumis melo HOM05D006491 ORTHO05D167626 8.1e-09 65.1 33 78.8
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.5e-07 60.8 36 69.4
MELO3C035679.2 Cucumis melo HOM05D003008 ORTHO05D003346 1.7e-06 57.4 32 84.4


User provided reference genes

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