Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 3.0e-310 1067.8 573 100.0
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 4.2e-272 941.0 526 96.4
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 1.6e-242 842.8 532 88.0
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.5e-229 799.7 523 83.2
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 2.9e-225 785.4 530 81.5
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 9.5e-208 727.2 522 76.8
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 1.1e-203 713.8 516 75.4
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 3.2e-203 712.2 531 74.4
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 3.0e-201 705.7 443 82.4
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 1.5e-197 693.3 498 75.7
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 2.0e-197 693.0 517 74.1
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 7.5e-197 691.0 540 69.4
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 2.2e-196 689.5 459 80.0
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 2.9e-196 689.1 483 76.4
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 4.9e-196 688.3 517 73.9
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.1e-195 687.2 450 79.8
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 1.4e-195 686.8 538 69.5
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 1.9e-195 686.4 513 71.9
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 5.4e-195 684.9 462 79.2
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 1.2e-194 683.7 583 67.8
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 2.7e-194 682.6 515 72.6
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.7e-194 682.6 454 79.5
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 6.0e-194 681.4 504 72.2
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 7.8e-194 681.0 455 78.0
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 7.8e-194 681.0 495 75.2
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 1.0e-193 680.6 533 69.6
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 1.7e-193 679.9 495 74.9
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 1.7e-193 679.9 524 71.2
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 2.3e-193 679.5 444 80.2
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 2.3e-193 679.5 444 80.2
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.0e-193 679.1 495 74.9
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 3.0e-193 679.1 533 69.4
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 3.9e-193 678.7 513 71.7
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 5.1e-193 678.3 549 68.5
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 6.6e-193 677.9 495 75.4
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 2.5e-192 676.0 515 71.1
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 3.3e-192 675.6 515 71.1
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 5.6e-192 674.9 448 80.4
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 7.3e-192 674.5 495 75.4
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 7.3e-192 674.5 518 72.8
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 9.5e-192 674.1 513 71.2
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 9.5e-192 674.1 515 70.9
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 9.5e-192 674.1 515 70.9
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 1.2e-191 673.7 585 65.8
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 1.6e-191 673.3 551 68.4
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 2.8e-191 672.5 444 78.8
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 2.8e-191 672.5 515 71.5
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 2.8e-191 672.5 435 80.7
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 4.7e-191 671.8 526 70.0
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 6.2e-191 671.4 532 71.2
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 6.2e-191 671.4 519 72.1
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 8.1e-191 671.0 517 71.2
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 1.4e-190 670.2 496 73.4
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 1.8e-190 669.8 451 79.4
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 5.2e-190 668.3 533 69.2
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 8.9e-190 667.5 513 70.0
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 8.9e-190 667.5 458 76.2
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 1.5e-189 666.8 535 68.4
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 3.4e-189 665.6 514 70.0
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 4.4e-189 665.2 429 81.4
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 9.9e-189 664.1 459 76.7
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 3.8e-188 662.1 440 78.9
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 1.9e-187 659.8 437 78.7
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 3.2e-187 659.1 520 69.0
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 4.1e-187 658.7 449 78.8
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 9.2e-187 657.5 413 83.1
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 6.0e-186 654.8 529 68.8
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 7.8e-186 654.4 569 66.3
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 7.8e-186 654.4 548 66.4
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 1.0e-185 654.1 441 77.8
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 1.3e-185 653.7 441 77.3
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 1.3e-185 653.7 581 66.3
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 6.6e-185 651.4 533 68.3
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 1.9e-184 649.8 427 79.2
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 3.3e-184 649.0 427 80.8
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 4.3e-184 648.7 530 70.2
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 2.1e-183 646.4 437 76.9
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 8.1e-183 644.4 500 70.0
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 8.1e-183 644.4 500 70.0
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 8.1e-183 644.4 420 80.7
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 1.8e-182 643.3 528 68.6
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.8e-182 643.3 442 76.0
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 4.0e-182 642.1 438 75.3
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 5.2e-182 641.7 475 73.3
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 6.9e-182 641.3 458 75.5
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 1.5e-181 640.2 521 68.9
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 2.0e-181 639.8 406 81.5
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 3.4e-181 639.0 568 62.7
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 5.8e-181 638.3 506 69.2
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 1.7e-180 636.7 450 75.3
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 3.8e-180 635.6 440 76.4
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 6.4e-180 634.8 436 75.9
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 1.1e-179 634.0 503 71.4
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 5.4e-179 631.7 487 70.2
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 9.3e-179 630.9 438 75.1
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.1e-178 629.8 514 68.5
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 6.6e-177 624.8 465 71.8
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 4.3e-176 622.1 404 78.2
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 2.8e-175 619.4 443 73.8
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.4e-174 616.3 444 73.6
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 1.2e-173 614.0 522 64.9
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 1.2e-173 614.0 526 66.5
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 8.4e-172 607.8 525 66.5
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 1.9e-171 606.7 425 76.7
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 3.2e-171 605.9 430 72.6
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 2.7e-170 602.8 452 69.5
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 6.7e-169 598.2 423 73.5
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 6.7e-169 598.2 472 68.9
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 1.5e-168 597.0 442 71.0
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 3.0e-161 572.8 516 65.5
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 3.3e-160 569.3 527 62.0
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 4.3e-160 568.9 450 68.4
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 1.4e-158 563.9 421 73.6
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 1.8e-150 537.0 451 64.5
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 1.8e-150 537.0 451 64.5
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.0e-137 494.6 443 59.1
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 1.8e-134 483.8 442 58.6
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 4.1e-134 482.6 440 58.6
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.0e-128 463.8 376 69.1
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 1.8e-121 440.7 375 65.9
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.7e-117 426.8 367 61.0
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 2.9e-116 423.3 365 64.9
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 3.4e-104 383.3 230 86.5
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.6e-98 364.4 418 48.8
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 2.6e-88 330.5 422 47.9
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.6e-82 311.2 286 62.6
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 4.1e-78 296.6 343 55.1
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 1.7e-76 291.2 456 40.4
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 6.4e-71 272.7 167 86.8
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.4e-70 271.6 384 39.3
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.5e-67 261.5 156 89.1
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 6.0e-61 239.6 396 34.8
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 1.7e-60 238.0 237 56.5
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.2e-56 225.3 406 35.0
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 2.4e-54 217.6 251 51.8
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 4.2e-54 216.9 452 35.2
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 1.3e-52 211.8 162 67.3
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 4.6e-37 160.2 142 64.8
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 6.3e-34 149.8 124 59.7
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 9.4e-30 136.0 121 61.2
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 2.3e-28 131.3 86 73.3
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.1e-25 122.5 140 51.4
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 1.0e-23 115.9 98 67.3
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 9.4e-22 109.4 382 26.4
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 3.6e-21 107.5 102 60.8
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 7.4e-11 73.2 447 23.7
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 8.2e-10 69.7 221 27.6
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 1.6e-08 65.5 67 58.2


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