Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026565.2 Cucumis melo HOM05D003369 ORTHO05D020257 8.5e-42 173.3 92 100.0
MELO3C027650.2 Cucumis melo HOM05D003369 ORTHO05D020257 6.7e-31 137.1 80 90.0
MELO3C027509.2 Cucumis melo HOM05D003369 ORTHO05D020257 2.8e-29 131.7 77 89.6
MELO3C022652.2 Cucumis melo HOM05D003369 ORTHO05D004089 8.5e-18 93.6 92 63.0
Sed0008109 Sechium edule HOM05D003369 ORTHO05D004089 1.2e-16 89.7 89 64.0
CsaV3_3G030590 Cucumis sativus L. HOM05D003369 ORTHO05D004089 1.2e-14 83.2 88 60.2
ClCG11G010900 Citrullus lanatus HOM05D003369 ORTHO05D004089 1.5e-14 82.8 88 60.2
ECA232G1960 Erigeron canadensis HOM05D003369 ORTHO05D004089 1.4e-12 76.3 86 54.7
TWI09G0152 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 3.1e-12 75.1 82 58.5
Lj5g0006652 Lotus japonicus HOM05D003369 ORTHO05D004089 4.1e-12 74.7 88 55.7
COL.COLO4_19461 Corchorus olitorius HOM05D003369 ORTHO05D004089 9.2e-12 73.6 88 52.3
Glyma.20G219600 Glycine max HOM05D003369 ORTHO05D004089 9.2e-12 73.6 88 54.5
RcHm_v2.0_Chr4g0447001 Rosa chinensis HOM05D003369 ORTHO05D004089 1.6e-11 72.8 89 50.6
Gohir.D06G186800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 4.5e-11 71.2 90 50.0
VMungo0720G1409 Vigna mungo HOM05D003369 ORTHO05D004089 4.5e-11 71.2 83 56.6
Glyma.18G240600 Glycine max HOM05D003369 ORTHO05D004089 5.9e-11 70.9 83 55.4
Lalb_Chr02g0149391 Lupinus albus HOM05D003369 ORTHO05D004089 5.9e-11 70.9 87 52.9
Phvul.010G077634 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 5.9e-11 70.9 87 54.0
Glyma.09G252000 Glycine max HOM05D003369 ORTHO05D004089 1.0e-10 70.1 83 55.4
Gohir.A06G179800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 1.0e-10 70.1 90 50.0
Gorai.010G219100 Gossypium raimondii HOM05D003369 ORTHO05D004089 1.0e-10 70.1 90 50.0
PSO017G0651 Papaver somniferum HOM05D003369 ORTHO05D004089 1.0e-10 70.1 97 50.5
Lalb_Chr06g0168441 Lupinus albus HOM05D003369 ORTHO05D004089 1.3e-10 69.7 87 51.7
Ca_09969_v3 Cicer arietinum L. HOM05D003369 ORTHO05D004089 2.9e-10 68.6 80 57.5
arahy.Tifrunner.gnm1.ann1.ABG2GV Arachis hypogaea HOM05D003369 ORTHO05D004089 3.8e-10 68.2 89 52.8
arahy.Tifrunner.gnm1.ann1.HI4H5F Arachis hypogaea HOM05D003369 ORTHO05D004089 3.8e-10 68.2 89 52.8
TWI53G1724 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 5.0e-10 67.8 83 55.4
CANSAT54G1399 Cannabis sativa HOM05D003369 ORTHO05D004089 8.6e-10 67.0 82 51.2
Thecc.10G184000 Theobroma cacao HOM05D003369 ORTHO05D004089 8.6e-10 67.0 88 48.9
Manes.10G002000 Manihot esculenta HOM05D003369 ORTHO05D004089 1.1e-09 66.6 82 48.8
PSO170G0385 Papaver somniferum HOM05D003369 ORTHO05D004089 1.5e-09 66.2 97 48.5
TAR633G0919 Trochodendron aralioides HOM05D003369 ORTHO05D004089 1.5e-09 66.2 88 50.0
VMungo1383G1217 Vigna mungo HOM05D003369 ORTHO05D004089 1.5e-09 66.2 83 53.0
Hund05383 Selenicereus undatus HOM05D003369 ORTHO05D004089 1.9e-09 65.9 86 50.0
Actinidia13643 Actinidia chinensis HOM05D003369 ORTHO05D004089 2.5e-09 65.5 88 48.9
Duzib114G1008 Durio zibethinus HOM05D003369 ORTHO05D004089 2.5e-09 65.5 89 47.2
MD13G1002600 Malus domestica HOM05D003369 ORTHO05D004089 3.3e-09 65.1 89 48.3
Atru.chr12.204 Acer truncatum HOM05D003369 ORTHO05D004089 4.3e-09 64.7 84 51.2
Ciclev10030740m.g Citrus clementina HOM05D003369 ORTHO05D004089 4.3e-09 64.7 83 51.8
Actinidia31631 Actinidia chinensis HOM05D003369 ORTHO05D004089 7.3e-09 63.9 88 48.9
Medtr6g086565 Medicago truncatula HOM05D003369 ORTHO05D004089 9.5e-09 63.5 83 51.8
Prupe.1G349800 Prunus persica HOM05D003369 ORTHO05D004089 1.2e-08 63.2 88 46.6
Gohir.A05G277600 Gossypium hirsutum HOM05D003369 ORTHO05D004089 1.6e-08 62.8 88 47.7
A03p22890 Brassica napus HOM05D003369 ORTHO05D004089 2.1e-08 62.4 86 47.7
BraA03t11513Z Brassica rapa HOM05D003369 ORTHO05D004089 2.1e-08 62.4 86 47.7
CSS0000037 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D020257 2.8e-08 62.0 91 42.9
Manes.07G142600 Manihot esculenta HOM05D003369 ORTHO05D004089 2.8e-08 62.0 83 48.2
QL05p063633 Quercus lobata HOM05D003369 ORTHO05D004089 2.8e-08 62.0 80 50.0
QL93p0201_0001 Quercus lobata HOM05D003369 ORTHO05D020257 2.8e-08 62.0 80 50.0
Aqoxy3G00685 Aquilegia oxysepala HOM05D003369 ORTHO05D004089 3.6e-08 61.6 88 45.5
Nn5g26838 Nelumbo nucifera HOM05D003369 ORTHO05D004089 4.7e-08 61.2 79 50.6
TPR.G35277 Trifolium pratense HOM05D003369 ORTHO05D004089 4.7e-08 61.2 82 48.8
vmacro06898 Vaccinium macrocarpon HOM05D003369 ORTHO05D004089 8.0e-08 60.5 83 48.2
FvH4_4g37220 Fragaria vesca HOM05D003369 ORTHO05D004089 1.0e-07 60.1 89 44.9
FAN12G0023 Fragaria x ananassa HOM05D003369 ORTHO05D020257 1.0e-07 60.1 89 44.9
FAN17G2799 Fragaria x ananassa HOM05D003369 ORTHO05D004089 1.0e-07 60.1 89 44.9
Rhsim04G0219100 Rhododendron simsii HOM05D003369 ORTHO05D004089 1.0e-07 60.1 84 46.4
THA.LOC104824367 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 1.0e-07 60.1 74 50.0
BcaB01g03521 Brassica carinata HOM05D003369 ORTHO05D004089 1.4e-07 59.7 86 45.3
DCAR_005880 Daucus carota HOM05D003369 ORTHO05D020257 1.4e-07 59.7 78 48.7
HanXRQChr15g0493711 Helianthus annuus HOM05D003369 ORTHO05D004089 2.3e-07 58.9 81 48.1
Medtr1g078370 Medicago truncatula HOM05D003369 ORTHO05D004089 2.3e-07 58.9 81 51.9
Rhsim03G0153200 Rhododendron simsii HOM05D003369 ORTHO05D004089 3.0e-07 58.5 83 45.8
Carub.0004s2301 Capsella rubella HOM05D003369 ORTHO05D004089 4.0e-07 58.2 83 44.6
DCAR_007356 Daucus carota HOM05D003369 ORTHO05D004089 4.0e-07 58.2 93 43.0
BcaB06g29170 Brassica carinata HOM05D003369 ORTHO05D004089 5.2e-07 57.8 83 47.0
BcaC01g05384 Brassica carinata HOM05D003369 ORTHO05D004089 5.2e-07 57.8 86 45.3
BcaC02g07330 Brassica carinata HOM05D003369 ORTHO05D004089 5.2e-07 57.8 83 47.0
A04p31100 Brassica napus HOM05D003369 ORTHO05D004089 5.2e-07 57.8 83 45.8
C03p27140 Brassica napus HOM05D003369 ORTHO05D004089 5.2e-07 57.8 86 45.3
C04p68490 Brassica napus HOM05D003369 ORTHO05D004089 5.2e-07 57.8 83 47.0
BolC3t15095H Brassica oleracea HOM05D003369 ORTHO05D004089 5.2e-07 57.8 86 45.3
BraA04t18565Z Brassica rapa HOM05D003369 ORTHO05D004089 5.2e-07 57.8 83 45.8
CSS0036715 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 6.8e-07 57.4 78 46.2
Nn2g10283 Nelumbo nucifera HOM05D003369 ORTHO05D004089 6.8e-07 57.4 84 47.6
Thhalv10016269m.g Eutrema salsugineum HOM05D003369 ORTHO05D004089 8.9e-07 57.0 94 42.6
Gohir.D05G279200 Gossypium hirsutum HOM05D003369 ORTHO05D004089 8.9e-07 57.0 88 45.5
Gorai.009G292700 Gossypium raimondii HOM05D003369 ORTHO05D004089 8.9e-07 57.0 88 45.5
BolC4t28349H Brassica oleracea HOM05D003369 ORTHO05D004089 1.2e-06 56.6 83 47.0
Haze_05901 Corylus avellana HOM05D003369 ORTHO05D004089 1.2e-06 56.6 83 47.0
Migut.F00574 Erythranthe guttata HOM05D003369 ORTHO05D004089 1.2e-06 56.6 84 44.0
Phvul.008G055600 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 1.2e-06 56.6 84 47.6
Sc05g0004490 Simmondsia chinensis HOM05D003369 ORTHO05D004089 1.2e-06 56.6 95 42.1
AUR62037781 Chenopodium quinoa HOM05D003369 ORTHO05D004089 1.5e-06 56.2 82 43.9
BcaC02g12730 Brassica carinata HOM05D003369 ORTHO05D004089 2.0e-06 55.8 83 45.8
CARHR135820 Cardamine hirsuta HOM05D003369 ORTHO05D004089 2.0e-06 55.8 79 46.8
PGR044G0140 Punica granatum HOM05D003369 ORTHO05D004089 2.0e-06 55.8 84 46.4
Sp4g23040 Schrenkiella parvula HOM05D003369 ORTHO05D004089 2.0e-06 55.8 83 47.0
Potri.013G090500 Populus trichocarpa HOM05D003369 ORTHO05D004089 2.6e-06 55.5 88 48.9
ATR1127G027 Amborella trichopoda HOM05D003369 ORTHO05D004089 3.4e-06 55.1 90 43.3
AUR62042224 Chenopodium quinoa HOM05D003369 ORTHO05D004089 5.7e-06 54.3 82 42.7
Duzib106G0164 Durio zibethinus HOM05D003369 ORTHO05D004089 5.7e-06 54.3 88 44.3
AL4G38590 Arabidopsis lyrata HOM05D003369 ORTHO05D004089 7.5e-06 53.9 79 45.6
AT2G40730 Arabidopsis thaliana HOM05D003369 ORTHO05D004089 7.5e-06 53.9 74 48.6
THA.LOC104814068 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 9.8e-06 53.5 85 47.1


User provided reference genes

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