Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 4.0e-56 221.1 104 100.0
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 7.6e-47 190.3 107 87.9
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 1.8e-32 142.5 102 72.5
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 6.9e-16 87.4 93 51.6
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 4.5e-15 84.7 93 53.8
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 4.5e-15 84.7 99 50.5
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.0e-14 83.6 93 48.4
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 3.8e-14 81.6 104 48.1
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 6.5e-14 80.9 93 52.7
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.6e-12 76.3 91 47.3
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 4.6e-12 74.7 102 45.1
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 4.6e-12 74.7 63 60.3
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 4.6e-12 74.7 63 60.3
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 4.6e-12 74.7 93 47.3
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 6.1e-12 74.3 99 40.4
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 6.1e-12 74.3 92 44.6
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 6.1e-12 74.3 95 52.6
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 7.9e-12 73.9 91 50.5
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 7.9e-12 73.9 93 49.5
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 7.9e-12 73.9 93 45.2
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 1.0e-11 73.6 102 47.1
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 1.0e-11 73.6 63 58.7
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 1.0e-11 73.6 63 60.3
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 1.0e-11 73.6 92 43.5
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.4e-11 73.2 63 58.7
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.4e-11 73.2 47 76.6
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.4e-11 73.2 47 76.6
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 2.3e-11 72.4 46 76.1
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.3e-11 72.4 97 45.4
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.9e-11 71.6 37 86.5
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 5.1e-11 71.2 112 42.9
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 6.7e-11 70.9 89 43.8
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 6.7e-11 70.9 48 79.2
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 8.8e-11 70.5 104 45.2
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 2.0e-10 69.3 45 73.3
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.3e-10 68.6 98 43.9
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 5.7e-10 67.8 55 61.8
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 1.3e-09 66.6 93 44.1
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 1.3e-09 66.6 94 45.7
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 1.3e-09 66.6 66 57.6
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 1.3e-09 66.6 95 44.2
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.7e-09 66.2 90 47.8
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 1.7e-09 66.2 31 96.8
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.7e-09 66.2 84 45.2
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 1.7e-09 66.2 93 41.9
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 1.7e-09 66.2 43 74.4
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.7e-09 66.2 97 42.3
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.7e-09 66.2 88 45.5
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 2.2e-09 65.9 52 59.6
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 2.2e-09 65.9 99 46.5
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 2.2e-09 65.9 47 66.0
Duzib268G0529 Durio zibethinus HOM05D004965 ORTHO05D004401 2.8e-09 65.5 97 42.3
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 2.8e-09 65.5 114 43.0
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 2.8e-09 65.5 96 41.7
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 3.7e-09 65.1 41 75.6
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 3.7e-09 65.1 97 37.1
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 4.8e-09 64.7 97 40.2
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.3e-09 64.3 47 66.0
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.1e-08 63.5 37 81.1
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 1.4e-08 63.2 97 40.2
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.4e-08 63.2 92 42.4
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 1.4e-08 63.2 37 75.7
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 1.4e-08 63.2 100 41.0
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 1.8e-08 62.8 46 67.4
MSTRG.2369 Avicennia marina HOM05D004965 ORTHO05D004401 2.4e-08 62.4 33 84.8
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 2.4e-08 62.4 99 40.4
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.1e-08 62.0 95 41.1
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 4.1e-08 61.6 93 43.0
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 4.1e-08 61.6 95 40.0
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 5.3e-08 61.2 97 44.3
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 5.3e-08 61.2 93 41.9
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 5.3e-08 61.2 94 39.4
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 5.3e-08 61.2 95 41.1
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 6.9e-08 60.8 46 58.7
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 6.9e-08 60.8 48 56.2
ECA246G4714 Erigeron canadensis HOM05D004965 ORTHO05D004401 6.9e-08 60.8 91 45.1
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 6.9e-08 60.8 37 75.7
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 6.9e-08 60.8 37 75.7
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 9.1e-08 60.5 87 40.2
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 1.2e-07 60.1 38 71.1
Lsat_1_v5_gn_8_161261 Lactuca sativa HOM05D004965 ORTHO05D004401 1.2e-07 60.1 29 93.1
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 1.5e-07 59.7 104 37.5
Sed0010056 Sechium edule HOM05D031204 ORTHO05D004401 2.0e-07 59.3 110 40.0
Sc04g0008760 Simmondsia chinensis HOM05D004965 ORTHO05D004401 4.5e-07 58.2 48 58.3
CDE04G1822 Ceratophyllum demersum HOM05D004965 ORTHO05D004401 1.0e-06 57.0 93 40.9
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 1.0e-06 57.0 91 39.6
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 1.3e-06 56.6 91 39.6
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.7e-06 56.2 35 68.6
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 1.7e-06 56.2 58 50.0
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.7e-06 56.2 93 37.6
HanXRQChr08g0209111 Helianthus annuus HOM05D004965 ORTHO05D004401 2.2e-06 55.8 29 86.2
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 2.2e-06 55.8 70 44.3
PGR083G1219 Punica granatum HOM05D004965 ORTHO05D004401 2.9e-06 55.5 93 37.6
AT1G69970 Arabidopsis thaliana HOM05D010176 ORTHO05D012455 3.8e-06 55.1 96 39.6
DCAR_025362 Daucus carota HOM05D004965 ORTHO05D004401 3.8e-06 55.1 42 61.9
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 3.8e-06 55.1 36 69.4
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 3.8e-06 55.1 36 69.4
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.8e-06 55.1 81 43.2
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 5.0e-06 54.7 51 54.9
BcaC08g45847 Brassica carinata HOM05D010176 ORTHO05D012455 8.5e-06 53.9 28 89.3
FAN17G0917 Fragaria x ananassa HOM05D004965 ORTHO05D004401 8.5e-06 53.9 50 54.0
Sp5g25080 Schrenkiella parvula HOM05D010176 ORTHO05D012455 8.5e-06 53.9 33 78.8
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 8.5e-06 53.9 92 37.0


User provided reference genes

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