Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.0e-16 89.0 45 100.0
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.3e-11 72.0 45 82.2
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 1.2e-09 65.5 45 71.1
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 1.2e-09 65.5 45 71.1
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 1.6e-09 65.1 45 71.1
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 6.1e-09 63.2 45 68.9
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 7.9e-09 62.8 45 66.7
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 1.3e-08 62.0 35 80.0
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 1.3e-08 62.0 45 68.9
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.8e-08 61.6 39 71.8
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.8e-08 61.6 34 85.3
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 1.8e-08 61.6 35 80.0
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 2.3e-08 61.2 39 71.8
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 3.0e-08 60.8 45 62.2
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 3.0e-08 60.8 45 64.4
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 3.9e-08 60.5 35 77.1
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 3.9e-08 60.5 35 77.1
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 3.9e-08 60.5 33 81.8
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 5.1e-08 60.1 33 81.8
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 5.1e-08 60.1 45 64.4
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 5.1e-08 60.1 45 64.4
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 5.1e-08 60.1 35 80.0
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 5.1e-08 60.1 39 69.2
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 5.1e-08 60.1 33 81.8
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 6.7e-08 59.7 39 66.7
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 6.7e-08 59.7 39 66.7
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 6.7e-08 59.7 35 77.1
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 8.7e-08 59.3 35 77.1
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 8.7e-08 59.3 45 62.2
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 8.7e-08 59.3 35 77.1
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 8.7e-08 59.3 39 69.2
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 8.7e-08 59.3 39 71.8
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 8.7e-08 59.3 33 78.8
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 8.7e-08 59.3 35 74.3
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 8.7e-08 59.3 45 62.2
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 8.7e-08 59.3 33 78.8
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 8.7e-08 59.3 45 64.4
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 1.1e-07 58.9 45 60.0
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 1.1e-07 58.9 33 78.8
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 1.1e-07 58.9 45 62.2
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 1.1e-07 58.9 45 62.2
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 1.1e-07 58.9 35 77.1
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 1.1e-07 58.9 45 60.0
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 1.1e-07 58.9 35 77.1
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 1.1e-07 58.9 39 66.7
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 1.1e-07 58.9 33 78.8
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 1.1e-07 58.9 39 69.2
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 1.5e-07 58.5 45 62.2
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 1.5e-07 58.5 45 62.2
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 1.5e-07 58.5 45 62.2
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 1.5e-07 58.5 39 66.7
SalBow4G2051 Salvia bowleyana HOM05D004299 ORTHO05D003557 1.5e-07 58.5 35 77.1
SGA_v2.0_scaffold50G18437 Striga asiatica HOM05D024109 ORTHO05D003557 1.5e-07 58.5 33 78.8
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 1.5e-07 58.5 35 80.0
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 1.9e-07 58.2 35 71.4
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 1.9e-07 58.2 35 74.3
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 1.9e-07 58.2 39 66.7
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 1.9e-07 58.2 45 57.8
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.9e-07 58.2 39 66.7
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 1.9e-07 58.2 39 66.7
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 2.5e-07 57.8 33 78.8
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 2.5e-07 57.8 39 64.1
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 2.5e-07 57.8 33 75.8
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.5e-07 57.8 45 57.8
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 3.3e-07 57.4 39 64.1
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 4.3e-07 57.0 33 75.8
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 4.3e-07 57.0 35 77.1
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 4.3e-07 57.0 33 81.8
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 4.3e-07 57.0 42 64.3
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 4.3e-07 57.0 45 57.8
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 5.7e-07 56.6 33 75.8
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 5.7e-07 56.6 35 71.4
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 5.7e-07 56.6 45 62.2
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 5.7e-07 56.6 34 70.6
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 5.7e-07 56.6 33 75.8
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 5.7e-07 56.6 33 75.8
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 5.7e-07 56.6 39 66.7
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 7.4e-07 56.2 33 75.8
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 7.4e-07 56.2 45 57.8
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 7.4e-07 56.2 35 74.3
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 7.4e-07 56.2 39 69.2
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 7.4e-07 56.2 45 57.8
Sp6g27070 Schrenkiella parvula HOM05D004299 ORTHO05D003557 7.4e-07 56.2 35 74.3
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 7.4e-07 56.2 45 60.0
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 9.7e-07 55.8 45 60.0
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 9.7e-07 55.8 39 64.1
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 9.7e-07 55.8 45 57.8
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.3e-06 55.5 33 75.8
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 1.3e-06 55.5 33 75.8
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 1.3e-06 55.5 33 75.8
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 1.3e-06 55.5 33 75.8
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 1.3e-06 55.5 33 75.8
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 1.3e-06 55.5 45 60.0
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 1.3e-06 55.5 45 60.0
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 1.3e-06 55.5 35 74.3
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 1.3e-06 55.5 45 53.3
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 1.3e-06 55.5 35 74.3
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 57.8
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 57.8
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 57.8
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 1.6e-06 55.1 39 64.1
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 57.8
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 57.8
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 1.6e-06 55.1 45 55.6
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 2.2e-06 54.7 45 57.8
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 2.2e-06 54.7 35 68.6
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 2.2e-06 54.7 45 55.6
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 2.8e-06 54.3 35 71.4
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 2.8e-06 54.3 45 55.6
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 2.8e-06 54.3 35 68.6
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 2.8e-06 54.3 33 69.7
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 4.8e-06 53.5 39 61.5
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 4.8e-06 53.5 35 71.4
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 4.8e-06 53.5 45 60.0
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 4.8e-06 53.5 45 60.0
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 4.8e-06 53.5 45 60.0
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 4.8e-06 53.5 33 75.8
Pp3c2_18130 Physcomitrium patens HOM05D027683 ORTHO05D003557 4.8e-06 53.5 41 61.0
BcaC01g02808 Brassica carinata HOM05D004299 ORTHO05D003557 6.3e-06 53.1 33 72.7
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 6.3e-06 53.1 45 55.6
Pp3c1_19370 Physcomitrium patens HOM05D027683 ORTHO05D003557 6.3e-06 53.1 35 71.4
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 8.2e-06 52.8 39 61.5
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 8.2e-06 52.8 39 61.5
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 8.2e-06 52.8 39 61.5
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 8.2e-06 52.8 45 51.1


User provided reference genes

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