Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 2.1e-91 339.0 167 100.0
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.0e-81 305.8 172 89.5
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.1e-75 285.8 174 85.1
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 5.1e-69 264.6 171 83.0
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 1.2e-62 243.4 178 73.6
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 2.1e-38 162.9 170 54.1
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 7.9e-38 161.0 170 53.5
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 6.7e-37 157.9 152 58.6
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 8.8e-37 157.5 166 53.0
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.1e-36 157.1 179 51.4
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 7.4e-36 154.5 174 52.9
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 9.7e-36 154.1 169 52.1
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 9.7e-36 154.1 174 52.9
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.3e-35 153.7 174 52.3
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.7e-35 153.3 160 52.5
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 2.8e-35 152.5 174 50.6
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 8.2e-35 151.0 163 53.4
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.8e-34 149.8 168 53.0
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 5.3e-34 148.3 175 50.3
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 5.3e-34 148.3 171 50.3
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 5.3e-34 148.3 175 49.7
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.2e-33 147.1 174 50.0
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 2.0e-33 146.4 152 55.3
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.6e-33 146.0 168 53.6
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 2.6e-33 146.0 168 51.8
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 4.5e-33 145.2 162 53.1
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 5.9e-33 144.8 149 55.0
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 5.9e-33 144.8 175 49.1
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.0e-32 144.1 183 48.1
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.0e-32 144.1 183 48.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 1.3e-32 143.7 163 51.5
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 2.9e-32 142.5 155 51.0
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.9e-32 142.5 165 50.9
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 5.0e-32 141.7 154 53.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 8.5e-32 141.0 173 48.6
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.1e-31 140.6 155 54.2
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.9e-31 139.8 153 53.6
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.9e-31 139.8 151 55.0
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 2.5e-31 139.4 153 51.6
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 3.2e-31 139.0 143 55.9
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 7.2e-31 137.9 163 49.1
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 1.2e-30 137.1 169 48.5
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-30 137.1 181 46.4
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 1.6e-30 136.7 181 47.5
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 3.6e-30 135.6 160 51.9
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.4e-29 133.7 185 45.9
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.9e-29 132.1 159 48.4
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 2.0e-28 129.8 188 46.8
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 2.6e-28 129.4 165 46.1
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.7e-27 126.7 144 52.1
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 7.7e-25 117.9 162 45.7
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 2.9e-24 115.9 153 45.8
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 1.1e-23 114.0 134 50.0
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 1.9e-23 113.2 155 43.9
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 3.2e-23 112.5 137 45.3
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 9.4e-23 110.9 141 48.2
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.2e-22 110.5 163 46.0
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.2e-22 110.5 154 45.5
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 1.6e-22 110.2 148 46.6
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 1.6e-22 110.2 156 44.2
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 1.6e-22 110.2 156 44.2
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.7e-22 109.4 152 42.1
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 3.6e-22 109.0 172 43.0
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 4.7e-22 108.6 156 42.9
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 6.1e-22 108.2 169 42.6
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-21 107.5 164 44.5
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.8e-21 106.7 158 44.3
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 2.3e-21 106.3 145 45.5
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 5.2e-21 105.1 171 41.5
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 8.8e-21 104.4 163 42.9
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.1e-20 104.0 170 41.8
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.1e-20 104.0 170 41.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 1.1e-20 104.0 160 43.1
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.5e-20 103.6 171 42.1
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.5e-20 103.6 171 42.1
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 1.5e-20 103.6 158 41.8
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 2.6e-20 102.8 156 41.7
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.3e-20 102.4 156 41.7
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.3e-20 102.4 156 41.7
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 5.7e-20 101.7 171 40.4
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 9.7e-20 100.9 155 42.6
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 1.3e-19 100.5 175 41.1
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.3e-19 100.5 177 39.0
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.3e-19 100.5 177 39.0
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-19 100.5 149 43.6
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-19 100.5 148 43.9
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 2.2e-19 99.8 175 38.9
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 3.7e-19 99.0 149 41.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 4.8e-19 98.6 170 43.5
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.3e-19 98.2 154 42.2
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 8.2e-19 97.8 158 39.2
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.8e-18 96.7 151 39.7
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 2.4e-18 96.3 153 42.5
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.0e-18 94.7 179 39.7
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 9.1e-18 94.4 150 38.0
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 1.6e-17 93.6 181 38.1
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 2.0e-17 93.2 147 43.5
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 2.0e-17 93.2 183 41.0
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.3e-16 90.5 176 35.2
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 2.9e-16 89.4 147 42.2
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 5.0e-16 88.6 142 38.7
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.9e-15 86.7 158 40.5
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.5e-15 86.3 145 40.7
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 1.6e-14 83.6 176 38.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 4.7e-14 82.0 166 38.6
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 6.1e-14 81.6 116 40.5
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.0e-13 80.9 165 37.6
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 1.0e-13 80.9 119 41.2
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 5.2e-13 78.6 142 37.3
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.2e-12 77.4 169 37.3
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.5e-12 77.0 145 38.6
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 7.5e-12 74.7 93 46.2
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 1.1e-10 70.9 138 35.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 2.0e-09 66.6 150 34.0
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 2.0e-09 66.6 51 62.7
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 3.5e-09 65.9 102 43.1
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 1.3e-08 63.9 158 38.0
unitig_62.g23243 Utricularia gibba HOM05D006473 ORTHO05D008108 5.0e-08 62.0 91 41.8
Oeu036758.1 Olea europaea HOM05D006473 ORTHO05D008108 1.6e-06 57.0 35 68.6
FAN02G3828 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.6e-06 55.8 106 38.7


User provided reference genes

Program Settings