Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 2.6e-175 618.6 317 100.0
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 2.0e-162 575.9 322 92.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.8e-152 542.7 330 87.6
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 2.2e-145 519.2 271 98.2
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.4e-128 463.4 332 74.4
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.4e-128 463.4 282 83.3
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.2e-128 462.2 332 74.4
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.1e-128 461.8 332 74.1
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 5.4e-128 461.5 330 75.8
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.6e-127 459.9 283 83.7
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 4.6e-127 458.4 333 74.2
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.0e-126 457.2 324 75.0
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.9e-126 455.3 326 74.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 5.0e-126 454.9 326 74.2
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.1e-125 453.8 334 73.1
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.5e-125 453.4 332 72.0
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 1.5e-125 453.4 323 74.0
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 3.3e-125 452.2 326 73.6
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 3.3e-125 452.2 309 78.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 3.3e-125 452.2 324 72.5
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 5.6e-125 451.4 337 71.2
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.1e-124 449.5 328 73.5
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.1e-124 449.5 318 73.9
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 2.8e-124 449.1 323 74.0
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 3.6e-124 448.7 330 71.2
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 6.2e-124 448.0 325 72.9
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 1.0e-123 447.2 323 73.1
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.0e-123 447.2 327 73.4
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.8e-123 446.4 324 73.5
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 3.1e-123 445.7 305 74.4
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.2e-122 443.7 312 73.7
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.4e-122 442.2 305 73.8
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 3.4e-122 442.2 329 72.0
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 4.4e-122 441.8 302 75.5
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.4e-122 441.8 305 76.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 4.4e-122 441.8 272 82.4
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 7.5e-122 441.0 308 75.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.5e-122 441.0 267 82.8
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 7.5e-122 441.0 323 72.1
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 9.8e-122 440.7 328 71.3
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.3e-121 440.3 273 78.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.3e-121 440.3 267 82.4
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.3e-121 440.3 327 71.9
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.7e-121 439.9 283 79.2
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.7e-121 439.9 270 82.2
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.7e-121 439.9 328 71.0
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 3.7e-121 438.7 318 72.3
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 4.9e-121 438.3 309 73.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 4.9e-121 438.3 313 72.2
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 4.9e-121 438.3 328 71.0
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 6.4e-121 438.0 273 78.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 6.4e-121 438.0 303 73.9
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 6.4e-121 438.0 273 80.2
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.4e-120 436.0 319 72.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 4.1e-120 435.3 304 75.3
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.1e-120 435.3 288 78.1
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 7.0e-120 434.5 273 78.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 7.0e-120 434.5 273 78.0
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 7.0e-120 434.5 302 73.5
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 9.2e-120 434.1 273 78.0
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 2.0e-119 433.0 273 77.7
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.0e-119 433.0 288 75.3
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 2.0e-119 433.0 273 77.7
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.7e-119 432.6 277 79.4
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.7e-119 432.6 330 71.2
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 3.5e-119 432.2 302 73.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 3.5e-119 432.2 302 74.2
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 4.6e-119 431.8 302 73.2
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-118 430.3 302 73.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 2.3e-118 429.5 318 69.5
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.3e-118 429.5 300 73.3
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 8.6e-118 427.6 280 78.2
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.5e-117 426.8 322 67.7
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.9e-117 426.4 328 69.8
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 2.5e-117 426.0 295 74.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 2.5e-117 426.0 295 74.2
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 5.6e-117 424.9 284 76.8
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 7.3e-117 424.5 276 76.1
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.6e-116 423.3 322 67.1
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 8.1e-116 421.0 283 76.3
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.1e-115 420.6 288 74.0
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 3.4e-114 415.6 319 69.0
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.7e-113 413.3 231 87.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.7e-113 413.3 231 87.4
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.1e-112 410.6 251 80.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 5.4e-112 408.3 324 67.9
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.0e-111 404.8 260 78.5
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 1.3e-110 403.7 276 73.9
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.1e-107 394.0 268 75.0
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.3e-107 392.9 233 83.7
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 4.0e-107 392.1 306 66.3
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 6.8e-107 391.3 283 73.5
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 8.9e-107 391.0 320 67.8
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.2e-106 390.6 230 83.0
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.7e-105 386.7 300 68.7
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 2.2e-105 386.3 282 70.6
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.4e-104 383.6 234 79.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.5e-101 372.9 239 77.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.1e-100 369.8 269 68.0
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.7e-97 360.1 269 65.8
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.6e-95 353.6 267 65.2
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 1.3e-94 350.5 283 63.3
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.9e-93 346.7 207 82.6
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.4e-88 330.5 279 60.2
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.9e-86 322.4 267 59.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 6.7e-86 321.6 299 58.9
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 9.6e-85 317.8 245 64.9
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 6.2e-76 288.5 264 56.1
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.3e-68 264.2 227 66.5
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 3.1e-67 259.6 275 55.3
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.4e-59 233.4 232 57.3
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 9.1e-59 231.5 241 54.4
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 3.9e-54 216.1 148 74.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.6e-50 203.4 160 70.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 9.4e-40 168.3 103 75.7
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 9.5e-24 115.2 71 76.1
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.0e-18 97.4 70 64.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.9e-10 69.3 129 39.5
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.2e-07 61.6 64 56.2


User provided reference genes

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