Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 1.5e-119 433.0 233 100.0
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 5.4e-93 344.7 226 80.1
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 1.1e-53 214.2 117 92.3
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.5e-47 193.7 215 50.7
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 4.5e-47 192.2 224 49.1
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 7.6e-47 191.4 218 50.5
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.3e-46 190.7 218 50.9
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.8e-46 189.1 214 47.2
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 1.9e-45 186.8 215 49.8
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.2e-45 185.7 233 45.5
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 5.5e-45 185.3 233 45.5
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 7.1e-45 184.9 233 45.5
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.2e-44 184.1 220 49.1
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 2.1e-44 183.3 221 46.2
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 4.6e-44 182.2 215 46.0
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 4.6e-44 182.2 226 46.5
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 7.9e-44 181.4 197 51.3
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.3e-43 180.6 221 46.2
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 6.7e-43 178.3 219 48.4
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 8.7e-43 177.9 214 49.1
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.1e-42 177.6 223 45.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 1.1e-42 177.6 210 51.9
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.1e-42 177.6 206 47.6
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.1e-42 177.6 225 47.6
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.1e-42 177.6 212 47.6
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.5e-42 177.2 224 46.0
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.9e-42 176.8 219 47.9
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 4.3e-42 175.6 233 45.9
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 4.3e-42 175.6 230 46.5
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.2e-41 173.3 195 47.2
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 2.8e-41 172.9 235 43.8
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 2.8e-41 172.9 231 47.2
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.7e-41 172.6 217 46.1
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 4.8e-41 172.2 211 45.0
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.4e-40 170.6 227 44.5
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.4e-40 170.6 227 44.5
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 1.4e-40 170.6 226 43.4
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.4e-40 170.6 200 48.5
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 2.4e-40 169.9 212 45.8
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.6e-39 166.4 210 45.2
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 5.9e-39 165.2 214 43.5
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 5.9e-39 165.2 227 44.1
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 7.6e-39 164.9 199 46.2
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.0e-38 164.5 242 43.4
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 1.7e-38 163.7 180 51.1
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 2.2e-38 163.3 209 44.5
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 6.5e-38 161.8 180 50.6
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 6.5e-38 161.8 215 41.4
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 4.2e-37 159.1 252 42.5
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 5.5e-37 158.7 170 53.5
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 9.3e-37 157.9 223 41.7
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.2e-36 157.5 170 52.9
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.6e-36 157.1 170 52.9
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 7.9e-36 154.8 232 43.1
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.9e-35 152.5 233 41.2
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.7e-33 147.1 185 47.0
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 8.2e-33 144.8 173 46.2
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 2.4e-32 143.3 165 46.1
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 7.7e-31 138.3 182 44.0
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.0e-30 137.9 165 48.5
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 6.5e-30 135.2 145 56.6
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.7e-28 129.8 156 50.0
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 4.7e-20 102.4 118 50.8
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 8.8e-19 98.2 250 30.4
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 2.6e-18 96.7 107 50.5
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 3.3e-18 96.3 153 43.1
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.8e-16 90.5 211 28.9
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.0e-15 87.0 231 31.6
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 8.5e-14 81.6 173 31.8
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 9.4e-13 78.2 79 50.6
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 2.1e-12 77.0 64 59.4
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.4e-11 74.3 175 28.0
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 2.6e-10 70.1 103 35.9
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 3.3e-10 69.7 113 39.8
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.4e-10 69.3 166 29.5
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.4e-10 69.3 166 29.5
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 3.7e-09 66.2 137 28.5


User provided reference genes

Program Settings