Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025961.2 Cucumis melo HOM05D007442 ORTHO05D009284 7.0e-60 233.8 121 100.0
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 5.0e-34 147.9 76 98.7
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.6e-27 126.3 76 89.5
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 4.1e-20 101.7 83 71.1
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.3e-18 95.9 76 69.7
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 3.5e-11 72.0 77 57.1
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 6.0e-11 71.2 76 57.9
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.0e-10 70.5 76 56.6
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.3e-10 70.1 77 57.1
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 8.6e-10 67.4 76 53.9
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.3e-09 65.5 77 53.2
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 4.3e-09 65.1 71 57.7
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 5.6e-09 64.7 76 52.6
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 5.6e-09 64.7 76 55.3
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.2e-08 63.5 76 53.9
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.7e-08 61.6 76 52.6
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 4.7e-08 61.6 76 52.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.7e-08 61.6 78 55.1
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 1.1e-07 60.5 80 53.8
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.1e-07 60.5 77 51.9
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.4e-07 60.1 77 54.5
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.8e-07 59.7 77 51.9
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.8e-07 59.7 117 41.0
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 3.1e-07 58.9 77 51.9
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 3.1e-07 58.9 77 51.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 8.9e-07 57.4 76 50.0
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.2e-06 57.0 77 50.6
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-06 57.0 72 54.2
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.5e-06 56.6 85 50.6
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 1.5e-06 56.6 76 52.6
CSS0040675 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.0e-06 56.2 77 46.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 2.0e-06 56.2 78 51.3
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.6e-06 55.8 76 46.1
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.6e-06 55.8 79 48.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.6e-06 55.8 77 50.6
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 3.4e-06 55.5 80 48.8
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 4.4e-06 55.1 83 50.6
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 4.4e-06 55.1 83 50.6
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 4.4e-06 55.1 83 50.6
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 4.4e-06 55.1 79 53.2
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 4.4e-06 55.1 80 50.0
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.4e-06 55.1 85 49.4
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 5.8e-06 54.7 80 48.8
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 5.8e-06 54.7 83 47.0
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 7.6e-06 54.3 83 48.2
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 9.9e-06 53.9 80 47.5
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 9.9e-06 53.9 76 52.6


User provided reference genes

Program Settings