Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 5.8e-76 287.7 174 100.0
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.5e-52 209.9 172 81.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.7e-41 172.6 172 73.3
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 3.1e-29 132.5 171 59.6
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.2e-25 120.6 179 54.2
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 6.1e-25 118.2 129 58.1
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 8.0e-25 117.9 168 53.6
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.4e-24 117.1 177 52.5
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.3e-24 116.3 129 58.1
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.0e-24 115.9 173 48.0
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 8.9e-24 114.4 183 47.5
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 8.9e-24 114.4 174 47.1
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.5e-23 113.6 175 49.1
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 1.5e-23 113.6 173 47.4
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.6e-23 112.8 176 47.7
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.4e-23 112.5 173 47.4
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.4e-23 112.5 173 50.9
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 5.7e-23 111.7 152 49.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 5.7e-23 111.7 177 50.8
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 9.8e-23 110.9 176 48.9
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 9.8e-23 110.9 176 46.0
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.3e-22 110.5 173 46.8
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.3e-22 110.5 173 46.8
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-22 110.2 174 53.4
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-22 110.2 174 53.4
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.7e-22 110.2 174 53.4
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.7e-22 110.2 176 47.7
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 2.8e-22 109.4 176 50.6
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 3.7e-22 109.0 177 45.8
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 6.3e-22 108.2 172 52.9
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 6.3e-22 108.2 174 47.7
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 5.4e-21 105.1 164 49.4
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 5.4e-21 105.1 151 51.0
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 7.0e-21 104.8 145 49.0
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 7.0e-21 104.8 173 49.1
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.6e-20 103.6 175 45.1
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 2.0e-20 103.2 160 48.1
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 2.7e-20 102.8 175 47.4
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.7e-20 102.8 165 49.1
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 2.7e-20 102.8 166 47.6
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.7e-20 102.8 158 46.2
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 3.5e-20 102.4 173 49.7
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 5.9e-20 101.7 98 63.3
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.8e-20 101.3 175 46.9
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.0e-19 100.9 157 49.7
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 1.3e-19 100.5 174 47.7
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.7e-19 100.1 89 66.3
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.7e-19 100.1 175 46.9
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.3e-19 99.8 110 56.4
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 2.9e-19 99.4 176 46.0
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.8e-19 99.0 162 45.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 3.8e-19 99.0 180 48.3
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 8.6e-19 97.8 196 43.9
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.5e-18 97.1 94 68.1
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.5e-18 96.3 174 51.1
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 2.5e-18 96.3 96 59.4
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 3.3e-18 95.9 104 55.8
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 3.3e-18 95.9 172 45.9
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 4.3e-18 95.5 178 49.4
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 4.3e-18 95.5 168 42.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 5.6e-18 95.1 175 49.7
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 9.5e-18 94.4 100 63.0
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.2e-17 94.0 83 72.3
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.6e-17 92.4 92 57.6
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 3.6e-17 92.4 148 43.2
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 4.7e-17 92.0 163 51.5
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 6.1e-17 91.7 164 45.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.0e-16 90.9 103 59.2
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.0e-16 90.9 176 43.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.0e-16 90.9 176 43.2
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.0e-16 90.9 118 53.4
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.4e-16 90.5 82 68.3
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.0e-16 89.4 104 55.8
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 6.8e-16 88.2 176 43.2
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 6.8e-16 88.2 171 42.7
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 6.8e-16 88.2 176 48.9
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 8.9e-16 87.8 79 60.8
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.0e-15 86.7 127 46.5
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 2.0e-15 86.7 179 44.1
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 2.6e-15 86.3 172 44.8
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 9.8e-15 84.3 186 46.2
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.3e-14 84.0 175 40.6
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.7e-14 83.6 158 41.8
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.7e-14 83.6 176 45.5
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.9e-14 82.8 177 40.1
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 8.3e-14 81.3 131 42.0
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 1.1e-13 80.9 170 47.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.1e-13 80.9 161 40.4
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.4e-13 80.5 162 40.1
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.4e-13 80.5 162 40.1
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 2.4e-13 79.7 178 43.3
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 7.0e-13 78.2 78 59.0
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.6e-12 77.0 207 38.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.9e-11 72.4 106 48.1
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 3.3e-10 69.3 185 37.3
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 5.6e-10 68.6 112 45.5
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 1.6e-09 67.0 175 34.3
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 2.1e-09 66.6 165 38.2
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 8.0e-09 64.7 48 66.7
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 1.4e-08 63.9 171 37.4
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 3.4e-07 59.3 49 61.2
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 3.4e-07 59.3 49 61.2
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 3.4e-07 59.3 49 61.2
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 1.3e-06 57.4 130 33.1


User provided reference genes

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