Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025368.2 Cucumis melo HOM05D003074 ORTHO05D002434 4.6e-56 221.1 118 100.0
CsaV3_3G005060 Cucumis sativus L. HOM05D003074 ORTHO05D002434 8.4e-34 147.1 125 69.6
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 2.0e-27 125.9 98 72.4
Sed0005061 Sechium edule HOM05D003074 ORTHO05D002434 1.4e-12 76.6 121 46.3
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 2.0e-11 72.8 119 42.0
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 2.4e-09 65.9 118 38.1
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 5.5e-09 64.7 69 56.5
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 7.1e-09 64.3 120 38.3
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 2.1e-08 62.8 70 50.0
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.1e-08 62.8 84 42.9
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.5e-08 62.0 68 48.5
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.5e-08 62.0 118 33.9
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.6e-08 61.6 118 33.9
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 6.0e-08 61.2 62 56.5
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 7.9e-08 60.8 121 38.0
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.0e-07 60.5 76 46.1
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.0e-07 60.5 62 56.5
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 1.3e-07 60.1 70 54.3
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 1.3e-07 60.1 77 49.4
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 2.3e-07 59.3 127 36.2
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 2.3e-07 59.3 77 49.4
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 2.3e-07 59.3 73 47.9
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.3e-07 59.3 73 47.9
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 3.0e-07 58.9 128 34.4
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 3.0e-07 58.9 118 39.0
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 3.0e-07 58.9 128 35.2
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.9e-07 58.5 74 51.4
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 3.9e-07 58.5 73 47.9
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 5.1e-07 58.2 59 54.2
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.1e-07 58.2 70 51.4
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.1e-07 58.2 70 51.4
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 5.1e-07 58.2 79 49.4
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.1e-07 58.2 88 42.0
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 6.7e-07 57.8 77 46.8
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.7e-07 57.4 70 51.4
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 1.1e-06 57.0 62 48.4
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.1e-06 57.0 130 35.4
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 1.1e-06 57.0 59 49.2
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.1e-06 57.0 117 35.0
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.5e-06 56.6 111 35.1
CsaV3_3G005050 Cucumis sativus L. HOM05D003074 ORTHO05D002434 1.5e-06 56.6 112 39.3
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.5e-06 56.6 59 54.2
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 1.5e-06 56.6 72 47.2
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 1.5e-06 56.6 118 36.4
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 1.5e-06 56.6 69 50.7
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 2.5e-06 55.8 59 50.8
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 2.5e-06 55.8 71 42.3
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.5e-06 55.8 118 37.3
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.5e-06 55.8 130 34.6
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.5e-06 55.8 90 38.9
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 3.3e-06 55.5 60 48.3
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.3e-06 55.5 62 48.4
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 4.3e-06 55.1 62 50.0
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.3e-06 55.1 62 48.4
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 4.3e-06 55.1 122 36.9
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.6e-06 54.7 62 51.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 5.6e-06 54.7 70 42.9
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 7.4e-06 54.3 78 39.7
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 7.4e-06 54.3 118 36.4
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 9.6e-06 53.9 83 44.6


User provided reference genes

Program Settings