Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 6.2e-152 540.8 280 100.0
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 7.6e-134 480.7 272 91.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 9.0e-127 457.2 275 86.9
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.2e-80 303.1 260 66.9
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 7.0e-47 191.8 303 46.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 5.6e-44 182.2 193 54.9
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 9.5e-44 181.4 178 61.2
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.0e-42 177.9 281 43.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.2e-42 175.6 185 57.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 6.8e-42 175.3 302 43.7
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.2e-41 174.5 115 74.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.2e-41 174.5 224 50.4
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.5e-41 174.1 157 62.4
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.5e-41 174.1 303 45.5
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.0e-41 173.7 178 56.7
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.4e-41 172.6 147 63.3
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.7e-40 170.6 178 56.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.2e-40 170.2 174 55.7
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.2e-40 170.2 292 42.5
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 4.9e-40 169.1 154 61.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.1e-39 167.9 234 48.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.1e-39 167.9 112 73.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.9e-39 167.2 280 43.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.4e-39 166.8 156 59.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 3.2e-39 166.4 177 54.8
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 4.1e-39 166.0 271 44.6
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 4.1e-39 166.0 217 48.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.1e-39 166.0 208 50.5
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 7.0e-39 165.2 289 40.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 7.0e-39 165.2 250 44.8
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 9.2e-39 164.9 283 40.3
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.6e-38 164.1 291 42.3
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 2.0e-38 163.7 153 60.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.0e-38 163.7 287 41.8
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.0e-38 163.7 226 47.8
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.7e-38 163.3 170 56.5
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 2.7e-38 163.3 240 46.2
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 3.5e-38 162.9 120 65.8
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 3.5e-38 162.9 283 42.4
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.0e-38 162.2 120 66.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 6.0e-38 162.2 134 63.4
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.0e-38 162.2 289 41.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.0e-37 161.4 226 44.7
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 2.3e-37 160.2 107 73.8
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.3e-37 160.2 255 43.9
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.0e-37 159.8 144 63.2
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 3.9e-37 159.5 107 73.8
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 3.9e-37 159.5 126 68.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 5.0e-37 159.1 118 67.8
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 8.6e-37 158.3 158 57.6
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.1e-36 157.9 132 62.9
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.5e-36 157.5 119 65.5
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.5e-36 157.5 277 42.6
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.3e-36 156.4 115 69.6
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 4.3e-36 156.0 107 71.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 5.6e-36 155.6 163 56.4
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 5.6e-36 155.6 148 59.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 7.3e-36 155.2 173 51.4
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 9.5e-36 154.8 289 39.8
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.2e-35 154.5 258 43.8
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.2e-35 154.5 168 53.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.2e-35 154.5 197 48.7
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.2e-35 154.5 118 65.3
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 2.1e-35 153.7 132 62.9
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-35 153.3 277 39.7
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-35 152.9 178 52.2
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.6e-35 152.9 180 52.2
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 4.7e-35 152.5 166 56.0
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.7e-35 152.5 109 67.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-34 151.4 159 54.7
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.1e-34 151.4 155 53.5
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-34 151.0 178 51.7
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.8e-34 150.6 178 51.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.8e-34 150.6 168 55.4
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.3e-34 150.2 159 55.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.3e-34 150.2 159 55.3
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-34 150.2 254 43.3
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.0e-34 149.4 100 74.0
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.0e-34 149.4 121 62.0
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 8.9e-34 148.3 143 58.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 8.9e-34 148.3 171 49.7
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.2e-33 147.9 159 52.8
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-33 147.9 125 62.4
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.5e-33 147.5 242 43.8
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 3.4e-33 146.4 180 47.8
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 7.5e-33 145.2 100 71.0
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 7.5e-33 145.2 196 46.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 9.8e-33 144.8 120 61.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.8e-33 144.8 186 49.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-32 144.1 117 63.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.7e-32 142.9 180 48.9
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.3e-32 141.7 197 43.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.3e-32 141.7 197 43.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.4e-31 141.0 101 67.3
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 5.4e-31 139.0 207 43.5
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.1e-31 138.7 150 56.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.2e-31 138.3 272 39.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.0e-29 134.8 208 43.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.7e-29 134.0 159 48.4
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.0e-29 133.3 196 45.9
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 6.6e-29 132.1 177 48.0
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 6.6e-29 132.1 226 42.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.5e-28 131.0 203 44.3
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.2e-27 127.9 167 47.3
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 2.3e-26 123.6 122 56.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.4e-25 119.4 177 39.5
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.4e-23 114.4 199 40.2
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-21 107.1 68 72.1
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 4.2e-15 86.3 220 32.3
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.3e-15 85.1 63 65.1
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.2e-11 72.4 148 35.1
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 5.3e-10 69.3 41 80.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 4.4e-09 66.2 108 34.3
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.6e-09 65.5 71 49.3
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 7.6e-09 65.5 78 41.0
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.9e-07 60.8 95 50.5
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.0e-06 55.8 108 41.7


User provided reference genes

Program Settings