Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C025126.2 Cucumis melo HOM05D005551 ORTHO05D007207 3.8e-48 194.5 98 100.0
ClCG02G022570 Citrullus lanatus HOM05D005551 ORTHO05D007207 2.8e-43 178.3 97 89.7
MELO3C014533.2 Cucumis melo HOM05D005551 ORTHO05D007207 2.4e-42 175.3 97 88.7
CsaV3_6G038690 Cucumis sativus L. HOM05D005551 ORTHO05D001189 3.1e-42 174.9 97 88.7
Sed0003862 Sechium edule HOM05D005551 ORTHO05D007207 1.9e-39 165.6 97 81.4
Thecc.09G251700 Theobroma cacao HOM05D005551 ORTHO05D007207 3.4e-33 144.8 97 69.1
Duzib150G0889 Durio zibethinus HOM05D005551 ORTHO05D007207 5.9e-33 144.1 97 70.1
CANSAT54G1233 Cannabis sativa HOM05D005551 ORTHO05D007207 7.7e-33 143.7 97 72.2
Atru.chr2.2010 Acer truncatum HOM05D005551 ORTHO05D007207 2.2e-32 142.1 97 69.1
Dinv24609 Davidia involucrata HOM05D005551 ORTHO05D007207 2.2e-32 142.1 97 71.1
Gohir.A13G219500 Gossypium hirsutum HOM05D005551 ORTHO05D007207 2.9e-32 141.7 97 70.1
Gohir.D13G223050 Gossypium hirsutum HOM05D005551 ORTHO05D007207 2.9e-32 141.7 97 70.1
Gohir.D13G223200 Gossypium hirsutum HOM05D005551 ORTHO05D007207 2.9e-32 141.7 97 70.1
Gorai.013G254300 Gossypium raimondii HOM05D005551 ORTHO05D007207 2.9e-32 141.7 97 70.1
TWI75G1278 Tripterygium wilfordii HOM05D005551 ORTHO05D007207 2.9e-32 141.7 97 69.1
MD15G1421300 Malus domestica HOM05D005551 ORTHO05D007207 1.1e-31 139.8 97 70.1
Manes.02G135300 Manihot esculenta HOM05D005551 ORTHO05D007207 1.1e-31 139.8 97 67.0
Atru.chr4.868 Acer truncatum HOM05D005551 ORTHO05D007207 1.9e-31 139.0 97 68.0
SGA_v2.0_scaffold28G11755 Striga asiatica HOM05D005551 ORTHO05D007207 1.9e-31 139.0 97 70.1
Carub.0001s0785 Capsella rubella HOM05D005551 ORTHO05D007207 2.5e-31 138.7 97 71.1
Nn2g10251 Nelumbo nucifera HOM05D005551 ORTHO05D007207 2.5e-31 138.7 97 68.0
QL01p016086 Quercus lobata HOM05D005551 ORTHO05D007207 2.5e-31 138.7 97 68.0
COL.COLO4_33261 Corchorus olitorius HOM05D005551 ORTHO05D007207 3.2e-31 138.3 97 67.0
CARHR008380 Cardamine hirsuta HOM05D005551 ORTHO05D007207 4.2e-31 137.9 97 69.1
FvH4_7g04540 Fragaria vesca HOM05D005551 ORTHO05D007207 4.2e-31 137.9 97 69.1
AL1G18920 Arabidopsis lyrata HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 70.1
AT1G08490 Arabidopsis thaliana HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 70.1
MSTRG.22962 Avicennia marina HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 66.0
C05p06600 Brassica napus HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 71.1
BolC5t29420H Brassica oleracea HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 71.1
BraA06t23757Z Brassica rapa HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 71.1
CSS0006172 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 66.0
CSS0046738 Camellia sinensis var. sinensis HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 66.0
Migut.I00341 Erythranthe guttata HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 68.0
FAN03G2212 Fragaria x ananassa HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 69.1
FAN06G0985 Fragaria x ananassa HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 69.1
FAN06G4389 Fragaria x ananassa HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 69.1
FAN10G0679 Fragaria x ananassa HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 69.1
Rhsim11G0088800 Rhododendron simsii HOM05D005551 ORTHO05D007207 5.5e-31 137.5 97 66.0
Sp1g07150 Schrenkiella parvula HOM05D005551 ORTHO05D007207 7.2e-31 137.1 97 70.1
vmacro01506 Vaccinium macrocarpon HOM05D005551 ORTHO05D007207 7.2e-31 137.1 97 64.9
Aa31sc55G30 Aethionema arabicum HOM05D005551 ORTHO05D007207 9.4e-31 136.7 97 70.1
Cpa.g.sc34.204 Carica papaya HOM05D005551 ORTHO05D007207 9.4e-31 136.7 97 70.1
Thhalv10007548m.g Eutrema salsugineum HOM05D005551 ORTHO05D007207 9.4e-31 136.7 97 70.1
Lsat_1_v5_gn_1_112501 Lactuca sativa HOM05D005551 ORTHO05D007207 9.4e-31 136.7 97 67.0
TPR.G8526 Trifolium pratense HOM05D005551 ORTHO05D007207 9.4e-31 136.7 97 67.0
Actinidia24636 Actinidia chinensis HOM05D005551 ORTHO05D007207 1.2e-30 136.3 97 66.0
Glyma.15G127400 Glycine max HOM05D005551 ORTHO05D007207 1.2e-30 136.3 97 66.0
Lj6g0008086 Lotus japonicus HOM05D005551 ORTHO05D007207 1.2e-30 136.3 97 68.0
SGA_v2.0_scaffold25G10959 Striga asiatica HOM05D005551 ORTHO05D007207 1.2e-30 136.3 101 67.3
Psat5g100640 Pisum sativum HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 68.0
Potri.009G066000 Populus trichocarpa HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 68.0
Prupe.1G566600 Prunus persica HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 68.0
unitig_749.g13431 Utricularia gibba HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 67.0
VMungo0540G2337 Vigna mungo HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 68.0
GSVIVG01037384001 Vitis vinifera HOM05D005551 ORTHO05D007207 1.6e-30 136.0 97 68.0
ECA234G2543 Erigeron canadensis HOM05D005551 ORTHO05D007207 2.1e-30 135.6 97 66.0
FvH4_7g04510 Fragaria vesca HOM05D005551 ORTHO05D007207 2.1e-30 135.6 97 69.1
Aqoxy2G00719 Aquilegia oxysepala HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 67.0
arahy.Tifrunner.gnm1.ann1.ADF2XW Arachis hypogaea HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 64.9
arahy.Tifrunner.gnm1.ann1.HLYA7R Arachis hypogaea HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 64.9
arahy.Tifrunner.gnm1.ann1.JZUI2V Arachis hypogaea HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 64.9
EL10Ac1g00799 Beta vulgaris HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 71.1
CiPaw.13G146700 Carya illinoinensis HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 68.0
Ciclev10015188m.g Citrus clementina HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 69.1
Lalb_Chr20g0119901 Lupinus albus HOM05D005551 ORTHO05D007207 2.7e-30 135.2 97 67.0
Phvul.006G131100 Phaseolus vulgaris HOM05D005551 ORTHO05D007207 4.7e-30 134.4 97 66.0
RcHm_v2.0_Chr1g0329781 Rosa chinensis HOM05D005551 ORTHO05D007207 4.7e-30 134.4 97 66.0
TAR369G0326 Trochodendron aralioides HOM05D005551 ORTHO05D007207 4.7e-30 134.4 97 67.0
Glyma.09G021000 Glycine max HOM05D005551 ORTHO05D007207 6.1e-30 134.0 97 66.0
PSO384G1940 Papaver somniferum HOM05D005551 ORTHO05D007207 6.1e-30 134.0 97 68.0
Sc06g0004770 Simmondsia chinensis HOM05D005551 ORTHO05D007207 6.1e-30 134.0 97 68.0
Lj2C43G5 Lonicera japonica HOM05D005551 ORTHO05D007207 7.9e-30 133.7 97 62.9
PGR119G1886 Punica granatum HOM05D005551 ORTHO05D007207 7.9e-30 133.7 97 68.0
Ca_16399_v3 Cicer arietinum L. HOM05D005551 ORTHO05D007207 1.0e-29 133.3 97 68.0
PSO339G0296 Papaver somniferum HOM05D005551 ORTHO05D007207 1.0e-29 133.3 97 67.0
THA.LOC104816954 Tarenaya hassleriana HOM05D005551 ORTHO05D007207 1.0e-29 133.3 97 69.1
AUR62000231 Chenopodium quinoa HOM05D005551 ORTHO05D007207 1.4e-29 132.9 97 69.1
AUR62006577 Chenopodium quinoa HOM05D005551 ORTHO05D007207 1.4e-29 132.9 97 69.1
Medtr3g083980 Medicago truncatula HOM05D005551 ORTHO05D007207 1.4e-29 132.9 97 64.9
DCAR_021423 Daucus carota HOM05D005551 ORTHO05D007207 1.8e-29 132.5 97 64.9
Cc02_g08840 Coffea canephora HOM05D005551 ORTHO05D007207 2.3e-29 132.1 97 64.9
EL10Ac4g10072 Beta vulgaris HOM05D005551 ORTHO05D007207 3.9e-29 131.3 97 67.0
Sabra09G0049100 Salix brachista HOM05D005551 ORTHO05D007207 3.9e-29 131.3 97 64.9
HanXRQChr05g0144321 Helianthus annuus HOM05D005551 ORTHO05D007207 5.1e-29 131.0 97 61.9
HanXRQChr14g0433441 Helianthus annuus HOM05D005551 ORTHO05D007207 5.1e-29 131.0 97 61.9
Peaxi162Scf00015g00309 Petunia axillaris HOM05D005551 ORTHO05D007207 5.1e-29 131.0 97 64.9
Cfa010168 Carpinus fangiana HOM05D005551 ORTHO05D007207 6.7e-29 130.6 97 63.9
Solyc05g055000.4 Solanum lycopersicum HOM05D005551 ORTHO05D007207 6.7e-29 130.6 97 62.9
Sopen05g033460 Solanum pennellii HOM05D005551 ORTHO05D007207 6.7e-29 130.6 97 62.9
CAN.G1465.10 Capsicum annuum HOM05D005551 ORTHO05D007207 8.8e-29 130.2 97 62.9
Nitab4.5_0000914g0030 Nicotiana tabacum HOM05D005551 ORTHO05D007207 8.8e-29 130.2 97 63.9
Eucgr.B03759 Eucalyptus grandis HOM05D005551 ORTHO05D007207 1.1e-28 129.8 97 64.9
Haze_23554 Corylus avellana HOM05D005551 ORTHO05D007207 2.0e-28 129.0 97 61.9
Nitab4.5_0008548g0010 Nicotiana tabacum HOM05D005551 ORTHO05D007207 2.6e-28 128.6 97 64.9
Hund27398 Selenicereus undatus HOM05D005551 ORTHO05D007207 3.3e-28 128.3 97 67.0
Zm00001eb195480 Zea mays HOM05D005551 ORTHO05D007207 3.3e-28 128.3 97 63.9
arahy.Tifrunner.gnm1.ann1.X0E2H2 Arachis hypogaea HOM05D005551 ORTHO05D007207 4.4e-28 127.9 97 60.8
Os12g0287300 Oryza sativa ssp. japonica HOM05D005551 ORTHO05D007207 7.4e-28 127.1 97 61.9
CDE04G0986 Ceratophyllum demersum HOM05D005551 ORTHO05D007207 3.7e-27 124.8 97 61.9
HPP92_018084 Vanilla planifolia HOM05D005551 ORTHO05D007207 5.3e-26 120.9 97 57.7
AagrBONN_evm.TU.Sc2ySwM_117.1158 Anthoceros agrestis HOM05D005551 ORTHO05D007207 9.1e-26 120.2 97 59.8
ATR1127G182 Amborella trichopoda HOM05D005551 ORTHO05D007207 1.2e-25 119.8 97 59.8
SEGI_36821 Sequoiadendron giganteum HOM05D005551 ORTHO05D007207 1.5e-25 119.4 97 58.8
Mapoly0010s0063 Marchantia polymorpha HOM05D005551 ORTHO05D007207 2.6e-25 118.6 97 56.7
SMO347G0159 Selaginella moellendorffii HOM05D005551 ORTHO05D007207 7.7e-25 117.1 97 57.7
BcaB07g34093 Brassica carinata HOM05D005551 ORTHO05D007207 6.5e-24 114.0 97 60.8
Pp3c24_10350 Physcomitrium patens HOM05D005551 ORTHO05D007207 7.2e-23 110.5 97 55.7
Pp3c23_8390 Physcomitrium patens HOM05D005551 ORTHO05D007207 8.0e-22 107.1 97 54.6
CBR_g4414 Chara braunii HOM05D005551 ORTHO05D007207 1.8e-21 105.9 97 51.5
CBR_g45931 Chara braunii HOM05D005551 ORTHO05D007207 1.8e-21 105.9 97 51.5
Sed0004770 Sechium edule HOM05D005551 ORTHO05D007207 7.4e-20 100.5 85 61.2
MCO11G678 Micromonas commoda HOM05D005551 ORTHO05D007207 2.6e-17 92.0 101 49.5
Actinidia29559 Actinidia chinensis HOM05D005551 ORTHO05D007207 5.9e-17 90.9 68 60.3
AUR62004128 Chenopodium quinoa HOM05D005551 ORTHO05D007207 1.7e-16 89.4 62 69.4
SalBow5G3184 Salvia bowleyana HOM05D005551 ORTHO05D007207 2.5e-15 85.5 62 64.5
MBI15_g32286_MAGBIO Magnolia biondii HOM05D005551 ORTHO05D007207 4.2e-15 84.7 66 60.6
RcHm_v2.0_Chr1g0329791 Rosa chinensis HOM05D005551 ORTHO05D007207 9.4e-15 83.6 62 64.5
Cre12.g525650 Chlamydomonas reinhardtii HOM05D005551 ORTHO05D007207 3.0e-13 78.6 98 42.9
Haze_26851 Corylus avellana HOM05D005551 ORTHO05D007207 5.7e-12 74.3 98 42.9
arahy.Tifrunner.gnm1.ann1.RY2JMZ Arachis hypogaea HOM05D005551 ORTHO05D007207 4.1e-10 68.2 94 36.2
MELO3C012755.2 Cucumis melo HOM05D005551 ORTHO05D007207 2.9e-08 62.0 42 71.4


User provided reference genes

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