Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.7e-52 208.4 106 100.0
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.8e-38 161.4 110 78.2
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.5e-13 79.0 111 44.1
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 4.3e-13 78.2 97 48.5
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 7.3e-13 77.4 73 53.4
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.2e-12 76.6 92 47.8
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.6e-12 76.3 95 46.3
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.1e-12 75.9 117 42.7
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.8e-12 75.5 90 42.2
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.6e-12 75.1 96 46.9
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 6.2e-12 74.3 96 43.8
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 2.3e-11 72.4 72 54.2
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 3.1e-11 72.0 102 39.2
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 5.2e-11 71.2 69 56.5
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 6.8e-11 70.9 74 50.0
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 6.8e-11 70.9 106 43.4
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 8.9e-11 70.5 99 47.5
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 1.2e-10 70.1 74 48.6
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.2e-10 70.1 74 47.3
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.2e-10 70.1 74 48.6
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.2e-10 70.1 74 48.6
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.5e-10 69.7 104 45.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 2.0e-10 69.3 61 55.7
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-10 68.9 97 40.2
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-10 68.9 97 40.2
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.6e-10 68.9 92 43.5
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 2.6e-10 68.9 98 46.9
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 3.4e-10 68.6 62 59.7
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 3.4e-10 68.6 107 37.4
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 4.4e-10 68.2 93 47.3
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 4.4e-10 68.2 86 48.8
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 4.4e-10 68.2 61 55.7
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 5.8e-10 67.8 63 54.0
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 9.9e-10 67.0 96 38.5
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.9e-10 67.0 105 40.0
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.3e-09 66.6 68 51.5
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.3e-09 66.6 75 54.7
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 1.7e-09 66.2 82 43.9
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 2.2e-09 65.9 89 43.8
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 4.9e-09 64.7 87 41.4
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 4.9e-09 64.7 62 54.8
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 4.9e-09 64.7 92 43.5
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 6.4e-09 64.3 110 39.1
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 8.4e-09 63.9 61 52.5
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.1e-08 63.5 99 39.4
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.1e-08 63.5 63 49.2
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.1e-08 63.5 105 41.0
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 1.4e-08 63.2 100 37.0
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.9e-08 62.8 61 50.8
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 1.9e-08 62.8 74 48.6
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.9e-08 62.8 97 41.2
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 2.4e-08 62.4 60 55.0
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 3.2e-08 62.0 79 43.0
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.1e-08 61.6 59 50.8
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 4.1e-08 61.6 90 41.1
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 4.1e-08 61.6 90 38.9
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 5.4e-08 61.2 105 37.1
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 7.1e-08 60.8 54 55.6
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 9.2e-08 60.5 98 39.8
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 9.2e-08 60.5 59 50.8
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 2.1e-07 59.3 102 37.3
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.7e-07 58.9 93 39.8
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 3.5e-07 58.5 84 38.1
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 3.5e-07 58.5 98 35.7
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 3.5e-07 58.5 79 38.0
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 3.5e-07 58.5 90 41.1
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 4.6e-07 58.2 99 37.4
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.6e-07 58.2 110 35.5
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.0e-06 57.0 53 47.2
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.3e-06 56.6 81 42.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.7e-06 56.2 55 45.5
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.7e-06 56.2 86 43.0
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.7e-06 56.2 118 33.9
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.0e-06 55.5 90 36.7
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.9e-06 55.1 95 37.9
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 5.1e-06 54.7 110 38.2
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 5.1e-06 54.7 96 35.4
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 5.1e-06 54.7 87 41.4
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 6.6e-06 54.3 86 41.9


User provided reference genes

Program Settings