Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 1.7e-54 215.7 104 100.0
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.2e-52 209.5 104 97.1
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 6.0e-52 207.2 104 95.2
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.4e-45 186.0 104 84.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.6e-44 182.6 105 84.8
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.3e-43 179.5 104 80.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 3.9e-43 177.9 105 82.9
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 8.7e-43 176.8 104 81.7
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 8.7e-43 176.8 103 80.6
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.1e-42 176.4 104 79.8
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.5e-42 176.0 104 80.8
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.9e-42 175.6 103 79.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 2.5e-42 175.3 104 80.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 3.3e-42 174.9 104 79.8
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 3.3e-42 174.9 104 79.8
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 5.6e-42 174.1 104 80.8
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.3e-41 172.9 104 79.8
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.3e-41 172.9 105 80.0
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 2.1e-41 172.2 102 79.4
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 2.1e-41 172.2 105 79.0
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.8e-41 171.8 102 79.4
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 4.8e-41 171.0 106 76.4
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 6.2e-41 170.6 104 77.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 6.2e-41 170.6 105 78.1
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.4e-40 169.5 105 76.2
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 1.8e-40 169.1 107 78.5
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.8e-40 169.1 104 78.8
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.4e-40 168.7 104 77.9
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.4e-40 168.7 102 78.4
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.4e-40 168.7 102 78.4
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.4e-40 168.7 112 75.0
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.4e-40 168.7 110 76.4
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 2.4e-40 168.7 104 78.8
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.4e-40 168.7 104 76.9
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.4e-40 168.7 104 77.9
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.1e-40 168.3 104 76.9
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 3.1e-40 168.3 103 78.6
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 3.1e-40 168.3 105 75.2
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.0e-40 167.9 104 77.9
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 4.0e-40 167.9 104 76.9
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 6.9e-40 167.2 106 76.4
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 9.0e-40 166.8 106 78.3
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.2e-39 166.4 106 75.5
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.5e-39 166.0 104 76.9
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.5e-39 166.0 106 75.5
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 3.4e-39 164.9 112 75.0
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 5.8e-39 164.1 106 74.5
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 7.6e-39 163.7 112 70.5
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 7.6e-39 163.7 112 69.6
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 7.6e-39 163.7 112 70.5
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 9.9e-39 163.3 112 70.5
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.7e-38 162.5 112 70.5
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.7e-38 162.5 113 69.9
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.2e-38 162.2 105 76.2
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.9e-38 161.8 112 69.6
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.4e-37 159.5 106 74.5
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.4e-37 159.5 107 72.9
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.9e-37 159.1 113 70.8
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 3.2e-37 158.3 114 69.3
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 4.2e-37 157.9 106 75.5
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 5.4e-37 157.5 106 69.8
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 7.1e-37 157.1 90 82.2
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.1e-37 157.1 113 68.1
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 9.3e-37 156.8 115 68.7
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.2e-36 156.4 114 68.4
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.2e-36 156.4 114 68.4
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.2e-36 156.4 114 68.4
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.7e-36 155.2 106 70.8
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 3.5e-36 154.8 106 72.6
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 4.6e-36 154.5 121 66.1
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 4.6e-36 154.5 107 71.0
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 6.0e-36 154.1 113 68.1
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 6.0e-36 154.1 114 69.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.0e-35 153.3 107 73.8
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.0e-35 153.3 106 72.6
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.0e-35 153.3 106 72.6
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.3e-35 152.9 91 79.1
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.8e-35 152.5 107 71.0
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.8e-35 152.5 113 67.3
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 3.0e-35 151.8 113 68.1
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 5.1e-35 151.0 106 72.6
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 6.7e-35 150.6 107 72.0
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 8.7e-35 150.2 114 67.5
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 8.7e-35 150.2 106 67.9
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 1.9e-34 149.1 106 69.8
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 2.5e-34 148.7 107 72.0
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 3.3e-34 148.3 106 68.9
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 4.3e-34 147.9 105 69.5
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 7.4e-34 147.1 101 72.3
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 7.4e-34 147.1 104 70.2
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 9.6e-34 146.7 115 67.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.3e-33 146.4 103 71.8
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 3.1e-32 141.7 105 64.8
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.5e-31 139.4 66 93.9
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.0e-30 136.7 104 64.4
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 2.2e-30 135.6 104 65.4
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 6.5e-30 134.0 104 64.4
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.1e-29 133.3 91 70.3
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.1e-29 133.3 91 68.1
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 1.4e-29 132.9 160 48.8
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.9e-29 132.5 94 69.1
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 2.5e-29 132.1 64 90.6
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 5.5e-29 131.0 93 67.7
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.0e-27 126.7 65 89.2
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 8.7e-27 123.6 77 74.0
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.1e-26 123.2 104 55.8
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 7.4e-26 120.6 96 62.5
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.3e-25 119.8 71 71.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.1e-25 119.0 62 87.1
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 8.2e-25 117.1 72 68.1
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.2e-23 113.2 100 63.0
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.2e-23 113.2 74 70.3
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.3e-18 95.1 67 73.1
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 5.7e-18 94.4 69 72.5
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 5.7e-18 94.4 97 53.6
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.3e-14 83.2 74 58.1
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 3.8e-14 81.6 69 63.8
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.6e-12 76.3 38 86.8
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 8.2e-09 63.9 35 74.3


User provided reference genes

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