Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.8e-142 509.2 258 100.0
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 3.7e-127 458.4 258 89.9
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.2e-117 426.8 258 85.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 8.6e-92 340.9 243 72.8
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.4e-57 227.3 267 52.1
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 6.5e-55 218.4 263 51.0
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.1e-53 213.4 266 48.5
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 3.9e-52 209.1 260 50.0
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 5.1e-52 208.8 267 47.9
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.1e-51 207.6 263 47.1
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.5e-51 207.2 263 49.0
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 2.1e-50 203.4 258 47.3
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.8e-50 203.0 262 47.3
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 3.7e-50 202.6 257 45.9
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 3.7e-50 202.6 262 46.2
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.8e-49 200.3 262 48.5
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.4e-49 199.9 250 47.2
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 5.0e-47 192.2 255 45.1
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 8.4e-47 191.4 265 43.4
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 4.6e-45 185.7 257 42.8
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 4.6e-45 185.7 257 45.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 1.9e-43 180.3 259 44.8
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 3.3e-43 179.5 229 45.0
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 5.7e-43 178.7 264 44.3
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.6e-42 177.2 247 43.7
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.2e-42 176.8 247 43.7
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 2.8e-42 176.4 254 45.3
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 6.3e-42 175.3 256 43.4
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 8.2e-42 174.9 261 41.0
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-41 174.1 253 45.5
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.1e-41 172.6 248 44.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 4.1e-41 172.6 262 42.0
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 4.1e-41 172.6 232 46.6
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 9.0e-41 171.4 269 41.6
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.0e-40 170.2 260 40.8
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 2.0e-40 170.2 233 45.1
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 3.4e-40 169.5 259 43.2
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.9e-40 168.7 248 43.5
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.0e-39 167.9 255 44.3
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.3e-39 167.5 257 40.9
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 2.2e-39 166.8 254 42.1
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 6.5e-39 165.2 262 42.4
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 6.5e-39 165.2 255 41.2
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 4.2e-38 162.5 269 39.4
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 4.2e-38 162.5 263 43.0
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.7e-37 159.8 203 46.8
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 2.7e-37 159.8 260 39.6
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 4.6e-37 159.1 233 44.2
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 7.9e-37 158.3 267 41.6
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 7.9e-37 158.3 224 43.3
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.0e-36 157.9 251 41.0
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.4e-36 157.5 264 39.8
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.5e-35 154.1 237 40.5
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.5e-35 153.3 250 39.2
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 4.3e-35 152.5 252 42.1
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 2.2e-34 150.2 238 40.8
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 2.2e-34 150.2 264 40.5
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 2.2e-34 150.2 252 40.9
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 6.3e-34 148.7 242 42.6
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.1e-33 147.9 286 38.5
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.1e-33 147.9 232 40.9
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-33 147.5 253 40.3
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.1e-33 146.4 259 36.7
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 2.6e-32 143.3 260 38.1
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 3.4e-32 142.9 262 38.5
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 3.4e-32 142.9 252 35.7
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.3e-31 141.0 243 41.2
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.3e-31 141.0 288 36.5
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 1.7e-31 140.6 221 39.4
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 2.2e-31 140.2 254 37.0
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.1e-30 137.9 286 36.7
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 2.5e-30 136.7 249 36.9
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.7e-29 133.3 254 35.8
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 4.7e-29 132.5 223 40.4
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 3.9e-28 129.4 265 34.7
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 2.0e-27 127.1 238 37.8
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 2.6e-27 126.7 276 33.3
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 7.4e-27 125.2 259 34.4
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 1.8e-25 120.6 119 53.8
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 1.8e-25 120.6 245 35.1
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.6e-24 117.5 314 33.4
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.6e-24 117.5 206 39.8
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 2.3e-20 103.6 83 60.2
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 6.7e-20 102.1 141 39.7
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 3.3e-19 99.8 82 53.7
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 7.5e-19 98.6 79 58.2
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 1.7e-18 97.4 238 30.7
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 4.8e-18 95.9 128 40.6
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 6.3e-18 95.5 79 57.0
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 8.2e-18 95.1 79 57.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.1e-17 94.7 79 55.7
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 1.1e-17 94.7 79 55.7
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.1e-17 94.7 79 55.7
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.1e-17 94.7 79 55.7
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 1.1e-17 94.7 79 55.7
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.4e-17 94.4 79 58.2
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 1.4e-17 94.4 79 55.7
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 3.1e-17 93.2 232 33.2
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 2.2e-15 87.0 83 51.8
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 9.8e-11 71.6 81 43.2
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 4.1e-09 66.2 80 46.2
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 9.1e-09 65.1 108 35.2
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 2.7e-08 63.5 85 42.4
MBI15_g04988_MAGBIO Magnolia biondii HOM05D002304 ORTHO05D002363 2.5e-06 57.0 60 41.7
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 5.5e-06 55.8 52 48.1
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 5.5e-06 55.8 112 34.8
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 5.5e-06 55.8 55 49.1
Duzib068G0017 Durio zibethinus HOM05D002304 ORTHO05D002363 7.2e-06 55.5 62 46.8
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 7.2e-06 55.5 64 42.2
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 7.2e-06 55.5 64 42.2
Ciclev10021188m.g Citrus clementina HOM05D002304 ORTHO05D002363 9.4e-06 55.1 54 46.3
Dinv38639 Davidia involucrata HOM05D002304 ORTHO05D002363 9.4e-06 55.1 52 50.0
PSO017G6198 Papaver somniferum HOM05D002304 ORTHO05D002363 9.4e-06 55.1 84 38.1
PSO478G4492 Papaver somniferum HOM05D002304 ORTHO05D002363 9.4e-06 55.1 84 38.1


User provided reference genes

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