Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 4.1e-44 181.0 92 100.0
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 3.7e-37 157.9 90 86.7
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 4.2e-33 144.4 76 94.7
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 3.8e-26 121.3 90 68.9
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 1.0e-15 86.7 88 51.1
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 5.2e-15 84.3 88 51.1
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 3.4e-14 81.6 90 48.9
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 5.7e-14 80.9 88 45.5
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 1.3e-13 79.7 88 47.7
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.2e-13 79.0 88 46.6
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 3.7e-13 78.2 88 47.7
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 1.8e-12 75.9 89 51.7
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 1.8e-12 75.9 98 45.9
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.1e-12 75.1 99 44.4
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 7.0e-12 73.9 101 44.6
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 9.2e-12 73.6 97 46.4
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 9.2e-12 73.6 90 48.9
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.2e-11 73.2 99 44.4
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.6e-11 72.8 73 49.3
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.6e-11 72.8 81 48.1
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.0e-11 72.4 88 44.3
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 2.0e-11 72.4 81 51.9
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.7e-11 72.0 75 48.0
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 4.5e-11 71.2 41 70.7
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 4.5e-11 71.2 88 43.2
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 7.8e-11 70.5 88 40.9
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 1.0e-10 70.1 96 43.8
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.0e-10 70.1 88 46.6
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 2.3e-10 68.9 89 44.9
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 2.9e-10 68.6 38 73.7
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.9e-10 68.6 83 43.4
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 2.9e-10 68.6 82 42.7
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 3.8e-10 68.2 88 40.9
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 6.6e-10 67.4 88 44.3
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 1.1e-09 66.6 98 40.8
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.5e-09 66.2 46 60.9
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.5e-09 66.2 91 42.9
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.5e-09 66.2 87 40.2
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.5e-09 66.2 99 36.4
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 1.5e-09 66.2 81 40.7
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 2.5e-09 65.5 77 40.3
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 5.6e-09 64.3 76 40.8
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 5.6e-09 64.3 88 38.6
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 1.6e-08 62.8 88 39.8
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 3.6e-08 61.6 82 42.7
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 6.1e-08 60.8 34 67.6
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.0e-07 60.1 90 36.7
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.0e-07 60.1 84 39.3
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 1.4e-07 59.7 62 46.8
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.4e-07 59.7 90 36.7
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 1.4e-07 59.7 50 56.0
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 2.3e-07 58.9 94 39.4
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 3.0e-07 58.5 91 37.4
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 4.0e-07 58.2 85 37.6
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 5.2e-07 57.8 32 68.8
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 6.8e-07 57.4 97 40.2
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 2.0e-06 55.8 42 59.5


User provided reference genes

Program Settings