Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 3.7e-124 448.4 248 100.0
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 9.7e-109 397.1 248 84.3
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.8e-94 349.7 250 70.8
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 6.9e-46 188.3 178 53.4
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.5e-45 187.2 227 47.6
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.6e-45 186.4 213 46.5
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.6e-45 186.4 167 58.1
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 7.6e-45 184.9 139 63.3
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.2e-44 183.3 126 68.3
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 6.4e-44 181.8 120 70.8
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 6.4e-44 181.8 129 65.9
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.1e-43 181.0 148 61.5
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 4.2e-43 179.1 128 64.1
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 4.2e-43 179.1 235 45.1
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 4.2e-43 179.1 209 53.6
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 4.2e-43 179.1 126 67.5
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 5.4e-43 178.7 119 72.3
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 7.1e-43 178.3 120 70.8
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 7.1e-43 178.3 126 67.5
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 9.3e-43 177.9 119 72.3
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.2e-42 177.6 224 44.6
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 1.2e-42 177.6 213 47.9
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 1.2e-42 177.6 204 48.5
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.6e-42 177.2 147 57.8
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.6e-42 177.2 221 45.7
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 1.6e-42 177.2 120 69.2
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 2.1e-42 176.8 135 63.7
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.7e-42 176.4 126 66.7
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 2.7e-42 176.4 122 69.7
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 3.5e-42 176.0 125 70.4
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 4.6e-42 175.6 132 64.4
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 6.0e-42 175.3 214 45.8
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 7.9e-42 174.9 156 55.1
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 1.8e-41 173.7 220 45.0
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 2.3e-41 173.3 133 59.4
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 3.9e-41 172.6 236 39.4
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 3.9e-41 172.6 119 65.5
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 5.1e-41 172.2 125 64.0
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 8.7e-41 171.4 119 70.6
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 8.7e-41 171.4 115 73.9
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.7e-41 171.4 115 73.9
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.1e-40 171.0 212 49.1
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.1e-40 171.0 212 49.1
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.1e-40 171.0 212 49.1
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 1.1e-40 171.0 123 69.9
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 1.9e-40 170.2 246 39.4
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.9e-40 170.2 115 73.9
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.3e-40 169.1 115 73.0
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 5.6e-40 168.7 213 44.6
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 5.6e-40 168.7 212 46.7
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.3e-39 167.5 118 66.1
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.7e-39 166.0 212 44.8
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 6.2e-39 165.2 206 47.6
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 6.2e-39 165.2 119 64.7
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 6.2e-39 165.2 124 63.7
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 8.1e-39 164.9 121 64.5
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 8.1e-39 164.9 121 64.5
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 1.1e-38 164.5 129 62.0
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.4e-38 164.1 203 48.8
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 2.4e-38 163.3 135 60.7
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 3.1e-38 162.9 117 65.0
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 6.9e-38 161.8 130 63.1
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 6.9e-38 161.8 211 46.9
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 9.0e-38 161.4 128 61.7
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 9.0e-38 161.4 195 47.7
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 9.0e-38 161.4 122 63.9
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 4.5e-37 159.1 128 60.2
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 9.9e-37 157.9 218 44.5
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.3e-36 157.5 202 48.0
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 2.2e-36 156.8 128 60.2
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 2.2e-36 156.8 119 63.0
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 2.9e-36 156.4 129 59.7
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 4.9e-36 155.6 128 58.6
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.4e-36 154.8 128 58.6
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 7.9e-34 148.3 123 52.0
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 3.0e-33 146.4 211 42.2
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 6.7e-33 145.2 108 61.1
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 3.3e-32 142.9 115 60.0
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 3.3e-32 142.9 105 65.7
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 2.1e-31 140.2 151 48.3
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 1.4e-30 137.5 176 59.7
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 3.1e-30 136.3 128 50.8
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 5.3e-30 135.6 105 62.9
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 1.5e-29 134.0 118 55.1
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 6.5e-28 128.6 97 60.8
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 5.5e-27 125.6 244 33.2
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 3.5e-26 122.9 114 49.1
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 6.7e-25 118.6 113 51.3
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 1.1e-22 111.3 108 53.7
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 6.9e-22 108.6 85 65.9
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 6.9e-22 108.6 122 45.1
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 2.0e-21 107.1 114 48.2
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.5e-19 100.1 108 47.2
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 3.2e-19 99.8 135 40.7
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.8e-09 67.4 40 77.5
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.0e-08 63.9 56 48.2
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 5.7e-08 62.4 48 62.5
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 2.8e-07 60.1 43 60.5
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 7.0e-06 55.5 61 54.1
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 9.1e-06 55.1 51 51.0


User provided reference genes

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