Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 1.0e-182 643.3 333 100.0
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 7.5e-181 637.1 333 98.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 1.7e-153 546.2 325 88.9
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.0e-145 518.8 329 79.0
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 9.9e-141 503.8 330 77.0
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.7e-140 503.1 330 76.1
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 4.9e-140 501.5 332 73.8
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 6.4e-140 501.1 330 74.8
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.1e-139 500.4 331 75.8
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 3.2e-139 498.8 329 75.7
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.1e-139 497.7 331 75.2
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.2e-138 496.9 330 76.4
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 3.5e-138 495.4 328 75.0
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 3.5e-138 495.4 330 72.7
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 3.5e-138 495.4 330 74.8
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.6e-138 495.0 330 75.8
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 6.0e-138 494.6 329 72.9
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 7.9e-138 494.2 328 74.7
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 7.9e-138 494.2 323 75.2
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.3e-137 493.4 330 75.5
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 3.9e-137 491.9 329 75.1
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.1e-136 490.3 329 73.3
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.1e-136 490.3 330 73.6
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.1e-136 490.3 333 79.9
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.5e-136 490.0 330 74.5
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 2.5e-136 489.2 334 74.3
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 3.3e-136 488.8 329 73.3
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 3.3e-136 488.8 326 74.5
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.3e-136 488.8 330 74.2
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.3e-135 486.9 330 73.3
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 2.8e-135 485.7 330 74.2
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 6.2e-135 484.6 330 72.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 1.4e-134 483.4 329 72.0
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.8e-134 483.0 329 72.9
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 5.3e-134 481.5 330 73.0
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 6.9e-134 481.1 329 74.2
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.9e-134 481.1 329 73.6
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 9.0e-134 480.7 321 74.1
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.5e-133 479.9 328 72.6
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 2.0e-133 479.6 330 71.2
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.0e-133 479.6 329 73.6
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.6e-133 479.2 323 73.7
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 3.4e-133 478.8 329 72.9
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 4.5e-133 478.4 327 73.4
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 5.8e-133 478.0 329 72.6
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 7.6e-133 477.6 329 72.9
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 9.9e-133 477.2 330 72.1
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.2e-132 476.1 329 71.4
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 8.4e-132 474.2 330 72.1
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 8.4e-132 474.2 330 73.3
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 8.4e-132 474.2 329 71.4
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 1.1e-131 473.8 328 72.9
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.1e-131 473.8 330 71.5
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.1e-131 473.8 321 72.9
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.9e-131 473.0 329 70.5
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 3.2e-131 472.2 330 71.8
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 5.5e-131 471.5 329 72.0
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 7.1e-131 471.1 330 70.6
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 7.1e-131 471.1 367 66.8
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 9.3e-131 470.7 312 75.3
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 1.6e-130 469.9 330 71.5
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.1e-130 469.5 330 71.5
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 6.0e-130 468.0 329 70.8
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 1.0e-129 467.2 322 71.4
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 2.3e-129 466.1 330 70.3
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 6.7e-129 464.5 391 64.2
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.1e-128 463.8 333 72.1
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 4.3e-128 461.8 355 67.3
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 5.6e-128 461.5 330 70.3
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.3e-127 460.3 330 71.8
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 4.8e-127 458.4 330 71.5
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 4.8e-127 458.4 330 70.9
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 8.2e-127 457.6 346 67.3
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.8e-126 456.4 331 68.3
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.0e-124 450.7 331 68.9
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.7e-124 449.9 329 66.9
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 2.9e-124 449.1 329 67.8
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.4e-123 446.8 344 67.2
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.6e-122 443.4 320 69.4
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.6e-114 416.8 330 66.1
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.7e-114 416.0 329 66.9
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.5e-112 409.5 329 63.2
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.7e-111 406.8 282 73.4
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.8e-111 406.0 339 61.9
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 4.8e-111 405.2 294 69.0
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 8.2e-111 404.4 334 62.9
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.8e-110 403.3 329 63.5
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 5.3e-102 375.2 330 56.4
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 2.3e-97 359.8 252 72.6
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.1e-96 357.5 329 55.0
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 4.0e-89 332.4 321 50.5
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 6.8e-89 331.6 235 69.4
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 4.5e-85 318.9 197 77.7
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.8e-84 315.8 199 76.4
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.5e-83 312.0 346 48.0
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.3e-79 300.8 326 47.9
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 4.8e-79 298.9 179 80.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 4.5e-77 292.4 201 76.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 8.3e-71 271.6 309 46.9
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.6e-68 261.9 326 43.3
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 6.6e-68 261.9 353 41.1
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.0e-65 254.6 370 44.1
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 1.5e-64 250.8 241 56.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 4.7e-58 229.2 169 65.1
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.0e-49 199.5 174 51.1
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 6.8e-49 198.7 300 43.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.5e-48 197.6 283 44.2
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.6e-48 196.8 153 67.3
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 6.6e-44 182.2 325 34.2
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.3e-34 151.4 125 65.6
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 4.4e-32 142.9 83 80.7
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 8.4e-31 138.7 124 58.1
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 2.4e-25 120.6 338 30.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.3e-20 104.0 74 62.2
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 9.3e-14 82.0 74 60.8
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 7.4e-11 72.4 134 38.8
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 7.4e-11 72.4 134 38.8
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 5.5e-06 56.2 45 66.7


User provided reference genes

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