Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 3.7e-64 248.1 127 100.0
CsaV3_7G023710 Cucumis sativus L. HOM05D004793 ORTHO05D004423 3.6e-43 178.3 109 87.2
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 3.5e-38 161.8 117 78.6
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 6.7e-37 157.5 128 71.1
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 1.3e-16 90.1 128 47.7
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 3.2e-15 85.5 133 44.4
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 5.5e-15 84.7 132 44.7
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 9.4e-15 84.0 133 44.4
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 1.6e-14 83.2 136 44.9
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 2.7e-14 82.4 128 46.1
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 6.1e-14 81.3 129 45.7
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 1.4e-13 80.1 136 46.3
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.1e-13 78.2 129 42.6
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.1e-12 77.0 129 41.9
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.1e-12 77.0 129 41.9
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 1.9e-12 76.3 139 41.7
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 1.9e-12 76.3 136 41.2
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 4.3e-12 75.1 143 41.3
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 4.3e-12 75.1 135 37.8
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.7e-12 74.7 128 41.4
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 5.7e-12 74.7 128 41.4
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 7.4e-12 74.3 136 40.4
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 7.4e-12 74.3 138 42.0
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 1.7e-11 73.2 132 42.4
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.7e-11 72.0 133 42.9
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.1e-10 70.5 140 40.0
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.4e-10 70.1 134 36.6
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 1.8e-10 69.7 134 38.1
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.1e-10 68.6 135 40.7
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 9.1e-10 67.4 142 40.1
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 1.5e-09 66.6 129 38.8
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 1.5e-09 66.6 129 41.9
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 1.5e-09 66.6 129 41.9
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.5e-09 66.6 129 40.3
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 1.5e-09 66.6 133 41.4
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 2.0e-09 66.2 127 39.4
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 2.0e-09 66.2 133 40.6
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 2.6e-09 65.9 138 42.8
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.0e-08 61.6 133 39.8
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 6.5e-08 61.2 142 38.7
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.5e-08 61.2 144 36.1
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 6.5e-08 61.2 143 41.3
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 8.5e-08 60.8 134 35.1
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 8.5e-08 60.8 131 35.9
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.1e-07 60.5 131 39.7
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 1.4e-07 60.1 138 39.1
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.9e-07 59.7 131 39.7
Haze_12687 Corylus avellana HOM05D004793 ORTHO05D004423 4.2e-07 58.5 104 39.4
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 4.2e-07 58.5 143 35.7
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 5.5e-07 58.2 139 36.0
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 5.5e-07 58.2 132 34.8
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 7.2e-07 57.8 134 38.8
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 7.2e-07 57.8 127 34.6
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 7.2e-07 57.8 127 31.5
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 9.4e-07 57.4 141 36.9
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 9.4e-07 57.4 141 36.9
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.6e-06 56.6 134 38.8
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 2.1e-06 56.2 134 38.1
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 2.1e-06 56.2 136 33.8
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 2.7e-06 55.8 137 37.2
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 2.7e-06 55.8 144 35.4
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.7e-06 55.8 53 56.6
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 2.7e-06 55.8 133 36.1
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 2.7e-06 55.8 136 36.0
ECA234G3783 Erigeron canadensis HOM05D004793 ORTHO05D004423 3.6e-06 55.5 161 33.5
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 6.1e-06 54.7 135 36.3
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 6.1e-06 54.7 140 34.3
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 6.1e-06 54.7 144 31.9


User provided reference genes

Program Settings