Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 6.1e-149 530.8 269 100.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 3.6e-117 425.2 317 74.4
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.1e-113 413.7 269 80.7
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 3.5e-112 408.7 269 79.6
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 4.3e-78 295.4 266 63.2
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 2.1e-72 276.6 268 55.6
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.1e-70 270.8 271 57.6
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 7.4e-70 268.1 190 67.4
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.1e-68 264.2 273 55.7
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 2.4e-68 263.1 269 56.5
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 6.9e-68 261.5 269 55.8
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 7.7e-67 258.1 271 55.7
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.4e-65 253.8 197 64.5
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 4.6e-64 248.8 192 63.5
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.0e-62 243.4 265 52.5
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.6e-62 243.0 191 63.9
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.2e-61 238.0 185 62.7
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.9e-60 235.0 281 50.2
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 2.2e-58 229.9 188 59.6
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 2.9e-58 229.6 280 48.6
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 6.5e-58 228.4 183 56.3
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.5e-58 228.4 290 48.3
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 6.5e-58 228.4 266 48.9
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 8.5e-58 228.0 187 60.4
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 1.1e-57 227.6 191 59.7
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.4e-57 227.3 179 61.5
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 3.2e-57 226.1 183 57.9
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 3.2e-57 226.1 179 60.3
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 5.5e-57 225.3 272 47.8
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 1.2e-56 224.2 180 60.0
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 1.2e-56 224.2 182 58.8
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.6e-56 223.8 190 58.4
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 3.6e-56 222.6 231 51.9
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 4.7e-56 222.2 180 59.4
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 4.7e-56 222.2 268 50.7
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 7.9e-56 221.5 187 58.3
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 1.4e-55 220.7 183 58.5
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 1.4e-55 220.7 183 58.5
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.8e-55 220.3 229 49.3
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 3.0e-55 219.5 189 57.1
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 3.9e-55 219.2 180 58.9
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 8.8e-55 218.0 268 49.3
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.1e-54 217.6 266 47.7
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 1.5e-54 217.2 179 58.1
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.6e-54 216.5 181 58.0
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.6e-54 216.5 181 58.0
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 4.4e-54 215.7 225 54.2
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 1.7e-53 213.8 195 55.9
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 4.8e-53 212.2 182 57.1
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 6.3e-53 211.8 174 60.3
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 2.4e-52 209.9 187 55.6
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 3.1e-52 209.5 180 57.8
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.7e-50 203.8 224 51.3
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 2.9e-50 203.0 243 48.6
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 1.5e-49 200.7 172 58.7
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 3.2e-49 199.5 273 44.3
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 4.2e-49 199.1 183 51.9
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.2e-48 197.6 153 60.8
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.2e-46 191.0 244 48.0
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 4.4e-46 189.1 290 43.4
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 4.1e-44 182.6 227 45.8
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 5.3e-44 182.2 225 45.8
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 5.3e-44 182.2 236 42.8
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 2.0e-43 180.3 189 48.7
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 2.9e-42 176.4 183 49.2
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 3.8e-42 176.0 154 53.9
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 1.9e-41 173.7 184 46.2
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 9.4e-41 171.4 147 51.7
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 5.2e-39 165.6 185 44.3
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 1.5e-38 164.1 203 45.8
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 4.4e-38 162.5 246 43.5
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 5.7e-38 162.2 209 45.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 9.8e-38 161.4 210 47.6
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 1.7e-37 160.6 116 66.4
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.7e-37 160.6 111 69.4
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 2.2e-37 160.2 209 46.9
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 5.4e-36 155.6 126 55.6
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 7.0e-36 155.2 171 51.5
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 3.6e-32 142.9 131 53.4
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 3.6e-32 142.9 155 47.1
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.0e-31 141.4 145 52.4
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 3.4e-30 136.3 109 60.6
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 7.0e-28 128.6 90 66.7
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.5e-27 126.3 177 43.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 1.1e-25 121.3 183 44.8
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.1e-25 121.3 96 63.5
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 2.5e-25 120.2 96 57.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 4.1e-20 102.8 265 30.2
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 5.4e-20 102.4 86 52.3
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 2.7e-19 100.1 86 51.2
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.1e-17 94.7 202 28.2
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 7.3e-17 92.0 74 58.1
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 3.1e-15 86.7 187 31.0
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 4.1e-12 76.3 59 66.1
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 2.3e-10 70.5 62 54.8
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 4.7e-08 62.8 70 48.6
arahy.Tifrunner.gnm1.ann1.M2YCYK Arachis hypogaea HOM05D007631 ORTHO05D009566 2.6e-06 57.0 86 40.7


User provided reference genes

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