Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 0.0e+00 1110.1 549 100.0
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 3.2e-136 489.6 411 67.2
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 2.4e-131 473.4 413 64.2
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.3e-121 441.0 455 54.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.5e-117 427.6 427 55.3
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.3e-116 424.5 429 55.7
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 2.2e-116 423.7 428 54.9
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.2e-116 423.7 428 54.9
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 6.3e-116 422.2 427 55.0
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 6.3e-116 422.2 427 56.7
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.3e-115 419.1 428 54.4
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 5.3e-115 419.1 438 55.9
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.5e-114 417.5 429 54.5
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.5e-114 417.5 427 54.8
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 1.5e-114 417.5 413 55.4
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 3.4e-114 416.4 429 54.3
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 2.9e-113 413.3 427 54.3
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 2.9e-113 413.3 428 55.1
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 3.8e-113 412.9 427 54.8
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 6.5e-113 412.1 427 54.6
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.1e-112 411.4 432 52.1
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 1.1e-112 411.4 429 53.6
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.2e-112 409.8 427 54.8
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 7.2e-112 408.7 429 53.8
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 9.4e-112 408.3 427 52.9
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.2e-111 407.9 428 53.7
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.2e-111 407.9 428 53.5
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.6e-111 407.5 427 54.6
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.6e-111 407.5 427 54.6
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 6.1e-111 405.6 411 55.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 7.9e-111 405.2 427 52.9
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 7.9e-111 405.2 427 52.9
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.9e-111 405.2 429 53.6
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 2.3e-110 403.7 430 53.7
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 2.3e-110 403.7 430 54.0
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 5.1e-110 402.5 427 53.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.5e-109 400.2 411 54.3
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 4.3e-109 399.4 427 52.2
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 5.7e-109 399.1 430 53.5
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 5.7e-109 399.1 429 54.1
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 5.7e-109 399.1 428 52.3
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 7.4e-109 398.7 427 52.2
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 9.7e-109 398.3 429 53.4
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.3e-108 397.9 427 52.2
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 1.7e-108 397.5 411 53.8
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 2.2e-108 397.1 409 55.3
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 4.8e-108 396.0 411 52.6
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 4.8e-108 396.0 411 53.5
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 4.8e-108 396.0 429 52.2
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 6.3e-108 395.6 428 51.9
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 1.1e-107 394.8 431 52.9
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 1.8e-107 394.0 430 53.3
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 3.1e-107 393.3 413 54.7
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 5.3e-107 392.5 411 53.0
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 5.3e-107 392.5 429 52.2
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 9.1e-107 391.7 430 53.0
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 1.2e-106 391.3 427 51.1
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 3.4e-106 389.8 430 52.6
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 1.3e-105 387.9 429 52.7
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 2.9e-105 386.7 412 53.4
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.1e-104 384.8 406 53.2
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.4e-104 384.4 429 52.0
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 9.4e-104 381.7 411 52.6
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 3.0e-102 376.7 429 52.0
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 6.7e-102 375.6 410 50.7
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.5e-101 374.4 413 49.6
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.3e-101 373.2 413 51.3
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.8e-100 369.4 413 50.6
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 8.2e-100 368.6 428 47.9
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 2.4e-99 367.1 398 50.0
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 4.1e-99 366.3 426 49.8
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 1.0e-97 361.7 494 46.2
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 5.7e-93 345.9 415 48.7
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 2.8e-92 343.6 379 53.3
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 4.8e-92 342.8 391 48.3
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 2.0e-90 337.4 414 45.7
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 3.5e-90 336.7 421 44.7
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 3.8e-89 333.2 412 47.1
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 8.0e-87 325.5 348 53.7
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 3.4e-85 320.1 427 49.4
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.4e-85 320.1 456 44.5
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 3.7e-84 316.6 348 51.7
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 3.5e-82 310.1 429 44.5
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.0e-81 308.5 403 42.7
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.1e-80 305.1 411 43.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.0e-78 297.0 340 52.4
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 3.4e-69 266.9 396 43.7
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 3.1e-62 243.8 142 78.9
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 7.5e-61 239.2 144 79.2
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.6e-58 231.5 139 78.4
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 2.0e-58 231.1 389 36.2
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 3.0e-57 227.3 148 75.0
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 6.6e-57 226.1 330 42.1
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 4.0e-54 216.9 158 71.5
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 5.2e-54 216.5 141 73.0
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 2.2e-52 211.1 141 76.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.9e-52 210.7 141 75.9
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 6.4e-52 209.5 150 68.0
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 4.1e-51 206.8 180 57.2
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.2e-50 205.3 387 32.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 7.8e-50 202.6 123 74.8
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.9e-48 198.0 140 75.7
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 3.3e-48 197.2 125 81.6
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 3.3e-48 197.2 318 42.1
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 2.3e-46 191.0 107 81.3
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 5.2e-46 189.9 122 76.2
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 3.2e-43 180.6 111 75.7
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 2.1e-42 177.9 131 67.9
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 2.7e-42 177.6 111 73.9
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 1.1e-40 172.2 397 29.5
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 4.7e-39 166.8 139 64.0
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 2.2e-36 157.9 123 63.4
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 6.0e-34 149.8 92 71.7
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 5.1e-33 146.7 94 69.1
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 4.3e-32 143.7 133 57.1
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 4.3e-32 143.7 101 73.3
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.6e-31 140.6 102 68.6
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 2.0e-29 134.8 101 69.3
MELO3C031999.2 Cucumis melo HOM05D003477 ORTHO05D013069 2.6e-29 134.4 74 90.5
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 3.8e-28 130.6 75 80.0
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 5.3e-22 110.2 68 76.5
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 4.5e-21 107.1 125 40.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 6.4e-20 103.2 64 75.0
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-19 101.7 73 67.1
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 5.1e-17 93.6 129 41.1
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.8e-14 85.1 402 22.9
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 4.8e-07 60.5 94 44.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.1e-06 59.3 32 87.5


User provided reference genes

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