Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 1.8e-199 699.1 365 100.0
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 8.5e-170 600.5 366 85.8
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 4.4e-158 561.6 366 77.0
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 7.3e-137 491.1 364 70.1
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 8.2e-80 301.6 391 52.2
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 1.4e-79 300.8 374 49.7
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 9.1e-79 298.1 264 58.3
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 1.9e-76 290.4 386 51.0
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 8.8e-74 281.6 267 55.8
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 1.4e-71 274.2 357 45.7
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 5.0e-69 265.8 259 55.2
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 1.6e-67 260.8 212 60.8
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 1.8e-66 257.3 215 58.1
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 1.1e-65 254.6 216 57.9
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 4.4e-65 252.7 252 52.4
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 7.5e-65 251.9 270 51.9
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 3.7e-64 249.6 384 40.4
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 4.8e-64 249.2 373 49.3
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 8.2e-64 248.4 382 42.1
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 1.4e-63 247.7 391 41.9
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 1.6e-62 244.2 212 57.5
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 3.5e-62 243.0 371 42.6
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 4.5e-62 242.7 268 48.9
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 2.9e-61 240.0 214 53.7
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 1.5e-60 237.7 374 42.2
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 3.2e-60 236.5 347 42.1
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 5.5e-60 235.7 257 51.0
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 9.4e-60 235.0 176 60.2
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 1.2e-59 234.6 376 38.8
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 2.1e-59 233.8 252 48.4
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 6.1e-59 232.3 221 52.5
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 6.1e-59 232.3 368 38.6
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 8.0e-59 231.9 154 70.1
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 8.0e-59 231.9 376 38.6
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.0e-58 231.5 224 52.2
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 1.8e-58 230.7 260 47.3
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 2.3e-58 230.3 241 48.1
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 8.8e-58 228.4 287 48.4
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 3.4e-57 226.5 264 43.6
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 4.4e-57 226.1 188 58.0
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 4.4e-57 226.1 364 41.5
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 9.8e-57 224.9 257 45.9
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 2.8e-56 223.4 161 62.1
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 2.4e-55 220.3 374 38.2
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 5.4e-55 219.2 186 57.0
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 1.2e-54 218.0 365 37.3
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 1.2e-54 218.0 212 50.9
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 2.0e-54 217.2 153 66.7
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 2.7e-54 216.9 153 66.7
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 2.7e-54 216.9 151 63.6
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 4.5e-54 216.1 155 63.2
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 1.7e-53 214.2 208 54.8
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 2.2e-53 213.8 228 51.3
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 2.9e-53 213.4 214 50.0
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 1.1e-52 211.5 231 48.5
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 2.5e-52 210.3 156 59.6
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 7.2e-52 208.8 171 55.0
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 9.4e-52 208.4 183 52.5
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 9.4e-52 208.4 153 61.4
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 2.7e-51 206.8 236 45.3
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 3.6e-51 206.5 153 58.2
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 3.6e-51 206.5 184 53.8
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 3.6e-51 206.5 203 51.2
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 8.0e-51 205.3 223 47.1
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 1.0e-50 204.9 153 60.8
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 1.8e-50 204.1 157 59.9
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 2.3e-50 203.8 262 42.4
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 2.3e-50 203.8 177 53.7
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 5.2e-50 202.6 169 57.4
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 6.8e-50 202.2 210 48.1
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 6.8e-50 202.2 157 60.5
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 8.8e-50 201.8 152 59.2
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 8.8e-50 201.8 212 49.1
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 1.2e-49 201.4 171 62.6
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.5e-49 201.1 169 55.6
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 4.4e-49 199.5 283 41.0
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 4.4e-49 199.5 155 58.7
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 9.8e-49 198.4 147 63.3
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 1.7e-48 197.6 154 57.8
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 2.8e-48 196.8 155 58.1
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 7.7e-46 188.7 154 55.2
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 1.7e-45 187.6 154 54.5
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 3.8e-45 186.4 168 51.8
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 1.5e-44 184.5 201 46.3
TAR371G0767 Trochodendron aralioides HOM05D006790 ORTHO05D007715 1.0e-42 178.3 116 69.0
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 1.8e-42 177.6 297 40.1
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 2.3e-42 177.2 225 41.8
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 1.8e-39 167.5 159 59.1
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 2.4e-39 167.2 114 69.3
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 4.6e-38 162.9 167 52.7
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 7.8e-38 162.2 123 61.8
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 5.0e-37 159.5 167 51.5
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 6.6e-37 159.1 203 46.8
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 2.5e-36 157.1 155 49.0
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 7.3e-36 155.6 305 38.4
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 9.5e-36 155.2 304 37.2
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 9.5e-36 155.2 167 50.9
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 8.0e-35 152.1 232 36.6
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 2.3e-34 150.6 96 76.0
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 2.3e-34 150.6 154 48.1
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 3.1e-34 150.2 153 48.4
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 4.0e-34 149.8 93 73.1
Lj7A8G41 Lonicera japonica HOM05D006790 ORTHO05D007715 1.5e-33 147.9 110 60.0
Mapoly0081s0071 Marchantia polymorpha HOM05D006790 ORTHO05D007715 9.2e-23 112.1 169 36.7
Peaxi162Scf00019g00411 Petunia axillaris HOM05D006790 ORTHO05D007715 7.8e-22 109.0 264 34.5
SMO141G0131 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 1.5e-20 104.8 209 33.0
SMO170G0045 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 3.3e-20 103.6 262 30.2
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 1.7e-16 91.3 40 92.5
Oeu049333.1 Olea europaea HOM05D006790 ORTHO05D007715 9.2e-15 85.5 73 50.7
SHI25900 Sapria himalayana HOM05D006790 ORTHO05D007715 2.1e-14 84.3 68 55.9
Pp3c17_13020 Physcomitrium patens HOM05D006790 ORTHO05D007715 2.3e-13 80.9 145 38.6
AagrBONN_evm.TU.Sc2ySwM_117.2827 Anthoceros agrestis HOM05D006790 ORTHO05D007715 6.6e-13 79.3 149 34.2
ECA236G2114 Erigeron canadensis HOM05D002798 ORTHO05D003052 2.0e-09 67.8 148 31.8
HanXRQChr15g0466321 Helianthus annuus HOM05D002798 ORTHO05D003052 4.4e-09 66.6 148 31.8
HanXRQChr01g0011791 Helianthus annuus HOM05D002798 ORTHO05D003052 2.9e-08 63.9 148 29.7
SGA_v2.0_scaffold4G01966 Striga asiatica HOM05D002798 ORTHO05D003052 3.8e-08 63.5 148 28.4
CBR_g20989 Chara braunii HOM05D000785 ORTHO05D000231 1.4e-07 61.6 164 28.7
Actinidia18110 Actinidia chinensis HOM05D006790 ORTHO05D007715 3.2e-07 60.5 127 34.6
HPP92_001068 Vanilla planifolia HOM05D002798 ORTHO05D003052 3.2e-07 60.5 150 30.0
Os03g0302200 Oryza sativa ssp. japonica HOM05D002798 ORTHO05D003052 1.6e-06 58.2 156 26.9
Atru.chr9.609 Acer truncatum HOM05D002798 ORTHO05D003052 3.5e-06 57.0 163 29.4
Zm00001eb396440 Zea mays HOM05D002798 ORTHO05D003052 4.6e-06 56.6 148 28.4


User provided reference genes

Program Settings