Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023781.2 Cucumis melo HOM05D001568 ORTHO05D004404 7.2e-17 90.1 70 100.0
Sed0014020 Sechium edule HOM05D001568 ORTHO05D004404 7.0e-12 73.6 67 64.2
Sed0003724 Sechium edule HOM05D001568 ORTHO05D004404 1.7e-10 68.9 67 61.2
Atru.chr8.777 Acer truncatum HOM05D001568 ORTHO05D004404 8.0e-08 60.1 67 50.7
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 1.8e-07 58.9 67 58.2
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 2.3e-07 58.5 67 53.7
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 2.3e-07 58.5 67 53.7
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 3.0e-07 58.2 67 55.2
CAN.G497.17 Capsicum annuum HOM05D001568 ORTHO05D004404 4.0e-07 57.8 67 50.7
Solyc02g089660.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 4.0e-07 57.8 67 50.7
PGSC0003DMG400010048 Solanum tuberosum HOM05D001568 ORTHO05D004404 4.0e-07 57.8 67 50.7
arahy.Tifrunner.gnm1.ann1.IG7GQE Arachis hypogaea HOM05D001568 ORTHO05D004404 5.2e-07 57.4 69 62.3
Nn4g23635 Nelumbo nucifera HOM05D001568 ORTHO05D004404 5.2e-07 57.4 67 53.7
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 6.7e-07 57.0 67 55.2
Cc07_g04900 Coffea canephora HOM05D001568 ORTHO05D004404 1.2e-06 56.2 67 49.3
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 2.0e-06 55.5 67 52.2
SalBow1G1780 Salvia bowleyana HOM05D001568 ORTHO05D004404 2.0e-06 55.5 67 47.8
SalBow1G7911 Salvia bowleyana HOM05D001568 ORTHO05D004404 2.0e-06 55.5 67 47.8
Oeu032864.1 Olea europaea HOM05D001568 ORTHO05D004404 2.6e-06 55.1 67 46.3
Potri.017G109800 Populus trichocarpa HOM05D001568 ORTHO05D004404 2.6e-06 55.1 35 74.3
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 2.6e-06 55.1 66 51.5
arahy.Tifrunner.gnm1.ann1.R2NHXZ Arachis hypogaea HOM05D001568 ORTHO05D004404 3.3e-06 54.7 69 63.8
Potri.004G105900 Populus trichocarpa HOM05D001568 ORTHO05D004404 4.4e-06 54.3 35 74.3
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 5.7e-06 53.9 67 52.2
A02p14040 Brassica napus HOM05D001568 ORTHO05D004404 7.5e-06 53.5 35 71.4
BraA02t06465Z Brassica rapa HOM05D001568 ORTHO05D004404 7.5e-06 53.5 35 71.4
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 7.5e-06 53.5 67 52.2
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 7.5e-06 53.5 67 50.7
Lalb_Chr17g0336571 Lupinus albus HOM05D001568 ORTHO05D004404 7.5e-06 53.5 67 53.7
DCAR_010979 Daucus carota HOM05D001568 ORTHO05D004404 9.7e-06 53.1 36 80.6
DCAR_010982 Daucus carota HOM05D001568 ORTHO05D004404 9.7e-06 53.1 36 80.6
Gohir.A07G073000 Gossypium hirsutum HOM05D001568 ORTHO05D004404 9.7e-06 53.1 70 47.1
THA.LOC104822692 Tarenaya hassleriana HOM05D001568 ORTHO05D004404 9.7e-06 53.1 67 47.8


User provided reference genes

Program Settings