Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 5.0e-171 604.4 311 100.0
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 7.8e-140 500.7 271 94.5
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 4.5e-135 485.0 271 91.5
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 3.4e-103 379.0 272 73.2
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 6.6e-70 268.5 276 55.4
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.0e-67 261.2 285 51.9
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 4.0e-67 259.2 282 51.8
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 5.2e-67 258.8 293 53.9
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 7.5e-66 255.0 278 55.0
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 3.5e-63 246.1 279 54.1
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.5e-61 240.7 282 51.1
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 7.3e-61 238.4 272 52.9
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 2.8e-60 236.5 272 53.7
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.8e-60 236.5 277 52.7
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 4.7e-60 235.7 276 48.2
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 4.7e-60 235.7 276 48.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 8.0e-60 235.0 276 48.9
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 5.8e-58 228.8 273 48.0
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 8.3e-57 224.9 272 47.8
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.4e-56 223.4 271 48.3
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 9.2e-56 221.5 281 45.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.0e-55 220.3 297 43.8
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 3.9e-54 216.1 303 44.6
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 8.6e-54 214.9 315 42.9
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 3.3e-53 213.0 296 44.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 5.6e-53 212.2 203 54.2
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.3e-53 211.8 203 56.7
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.2e-52 211.1 206 53.4
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.1e-52 210.3 205 53.7
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.1e-51 208.0 249 48.6
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.8e-51 207.2 206 54.4
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 5.2e-51 205.7 239 49.0
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 2.0e-50 203.8 210 52.4
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 3.4e-50 203.0 253 45.8
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 3.4e-50 203.0 287 43.6
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.4e-50 202.6 272 46.0
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.3e-49 201.1 271 46.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.7e-49 199.5 240 47.5
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.1e-48 198.0 280 45.7
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 1.4e-48 197.6 275 45.1
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 3.2e-48 196.4 272 43.8
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 5.4e-48 195.7 271 44.6
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.2e-47 194.5 301 42.5
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 1.2e-47 194.5 220 50.0
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 2.1e-47 193.7 279 44.1
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 4.6e-47 192.6 280 44.6
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.3e-46 191.0 288 43.1
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.7e-46 190.7 278 42.4
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.3e-46 190.3 286 42.7
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.3e-46 190.3 277 44.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 3.0e-46 189.9 275 43.3
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 3.9e-46 189.5 257 43.6
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 8.6e-46 188.3 283 42.8
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 8.6e-46 188.3 227 48.0
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.1e-45 188.0 287 40.8
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.6e-44 183.0 275 44.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 6.2e-44 182.2 304 42.8
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 6.2e-44 182.2 276 42.4
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 6.2e-44 182.2 256 46.9
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.1e-43 181.4 256 44.5
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 6.8e-43 178.7 276 44.6
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 8.9e-43 178.3 275 41.5
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.0e-42 177.2 211 49.3
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.6e-42 176.8 276 44.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 4.4e-42 176.0 274 40.9
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 9.9e-42 174.9 284 42.3
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 3.7e-41 172.9 237 45.6
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 4.9e-41 172.6 279 41.2
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 5.4e-40 169.1 290 40.7
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 8.9e-35 151.8 160 53.8
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.2e-34 151.4 305 35.7
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 7.6e-34 148.7 150 50.0
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 8.4e-33 145.2 195 46.2
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.3e-28 131.3 205 38.0
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 3.6e-28 129.8 203 40.4
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 4.0e-27 126.3 243 37.9
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 6.9e-27 125.6 170 44.7
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.2e-26 124.8 212 36.8
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.6e-26 123.6 146 45.9
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 3.4e-26 123.2 249 35.7
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 4.6e-23 112.8 146 45.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 2.8e-20 103.6 106 51.9
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 9.9e-18 95.1 153 40.5
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 1.2e-15 88.2 86 44.2
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 7.9e-15 85.5 198 27.8
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.8e-14 84.3 188 35.1
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 3.3e-13 80.1 226 32.7
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.3e-12 78.2 132 39.4
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 8.1e-12 75.5 238 30.7
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 1.4e-11 74.7 123 40.7
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 6.9e-11 72.4 125 40.0
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 2.0e-10 70.9 212 25.5
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 1.0e-09 68.6 269 25.7
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 3.8e-09 66.6 59 52.5
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 8.4e-09 65.5 128 32.8
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 1.1e-08 65.1 95 35.8
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.2e-07 61.6 128 33.6


User provided reference genes

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