Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023756.2 Cucumis melo HOM05D008193 ORTHO05D010324 7.2e-59 230.3 113 100.0
MBI04_g15068_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 3.5e-37 158.3 99 78.8
Sed0007015 Sechium edule HOM05D008193 ORTHO05D010324 3.5e-37 158.3 99 78.8
CsaV3_UNG209710 Cucumis sativus L. HOM05D008193 ORTHO05D010324 7.7e-37 157.1 97 80.4
CANSAT16G0055 Cannabis sativa HOM05D008193 ORTHO05D010324 1.7e-36 156.0 97 79.4
Aa31csc464G50 Aethionema arabicum HOM05D008193 ORTHO05D010324 6.5e-36 154.1 99 77.8
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 8.5e-36 153.7 97 77.3
AT2G07696 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
ATMG01270 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
BcaC09g49584 Brassica carinata HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
BolSC28t60333H Brassica oleracea HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
BraSC48t46277Z Brassica rapa HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
BraSC77t46639Z Brassica rapa HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
BraSC77t46658Z Brassica rapa HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
CARHR283470 Cardamine hirsuta HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
Potri.007G061841 Populus trichocarpa HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 77.3
Sp3g25900 Schrenkiella parvula HOM05D008193 ORTHO05D010324 3.2e-35 151.8 97 78.4
Nn003s41380 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.5e-35 151.0 97 77.3
Nn1g09926 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.5e-35 151.0 97 77.3
Nn1g10017 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.5e-35 151.0 97 77.3
Cpa.g.sc263.27 Carica papaya HOM05D008193 ORTHO05D010324 2.8e-34 148.7 100 75.0
Oeu040256.1 Olea europaea HOM05D008193 ORTHO05D010324 3.6e-34 148.3 97 74.2
Aqoxy3G01138 Aquilegia oxysepala HOM05D008193 ORTHO05D010324 4.7e-34 147.9 99 73.7
AUR62041694 Chenopodium quinoa HOM05D008193 ORTHO05D010324 1.4e-33 146.4 99 72.7
Cc00_g01650 Coffea canephora HOM05D008193 ORTHO05D010324 3.0e-33 145.2 97 73.2
BolSC28t60437H Brassica oleracea HOM05D008193 ORTHO05D010324 5.2e-33 144.4 97 76.3
CsaV3_5G020360 Cucumis sativus L. HOM05D008193 ORTHO05D010324 6.8e-33 144.1 97 74.2
RcHm_v2.0_MTg0498331 Rosa chinensis HOM05D008193 ORTHO05D010324 8.8e-33 143.7 97 75.3
AUR62042350 Chenopodium quinoa HOM05D008193 ORTHO05D010324 1.2e-32 143.3 99 71.7
Rhsim10G0162200 Rhododendron simsii HOM05D008193 ORTHO05D010324 1.2e-32 143.3 99 64.6
DCAR_032456 Daucus carota HOM05D008193 ORTHO05D010324 1.5e-32 142.9 97 72.2
AUR62026427 Chenopodium quinoa HOM05D008193 ORTHO05D010324 2.6e-32 142.1 99 70.7
vmacro19456 Vaccinium macrocarpon HOM05D008193 ORTHO05D010324 9.8e-32 140.2 99 62.6
Os12g0524750 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 1.7e-31 139.4 97 72.2
Hund27588 Selenicereus undatus HOM05D008193 ORTHO05D010324 2.8e-31 138.7 97 71.1
Hund27818 Selenicereus undatus HOM05D008193 ORTHO05D010324 2.8e-31 138.7 97 71.1
Hund28868 Selenicereus undatus HOM05D008193 ORTHO05D010324 2.8e-31 138.7 97 71.1
Hund28881 Selenicereus undatus HOM05D008193 ORTHO05D010324 2.8e-31 138.7 97 71.1
Hund29086 Selenicereus undatus HOM05D008193 ORTHO05D010324 2.8e-31 138.7 97 71.1
AUR62026431 Chenopodium quinoa HOM05D008193 ORTHO05D010324 2.4e-30 135.6 99 68.7
PSO017G1916 Papaver somniferum HOM05D008193 ORTHO05D010324 3.1e-30 135.2 97 63.9
PSO170G6554 Papaver somniferum HOM05D008193 ORTHO05D010324 3.1e-30 135.2 97 63.9
CDE02G0514 Ceratophyllum demersum HOM05D008193 ORTHO05D010324 2.0e-29 132.5 97 67.0
Lsat_1_v5_gn_4_134101 Lactuca sativa HOM05D008193 ORTHO05D010324 3.5e-29 131.7 99 61.6
MBI14_g38262_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 1.7e-28 129.4 100 69.0
MELO3C015621.2 Cucumis melo HOM05D008193 ORTHO05D010324 5.0e-28 127.9 79 81.0
HanXRQChr09g0260701 Helianthus annuus HOM05D008193 ORTHO05D010324 8.6e-28 127.1 97 59.8
HanXRQChr08g0225561 Helianthus annuus HOM05D008193 ORTHO05D010324 4.3e-27 124.8 99 58.6
Os09g0519601 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 2.6e-24 115.5 92 66.3
SEGI_25774 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 3.9e-20 101.7 102 51.0
SEGI_39408 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 3.9e-20 101.7 102 51.0
Gorai.001G165300 Gossypium raimondii HOM05D008193 ORTHO05D010324 2.5e-19 99.0 99 54.5
SabraMtG0002400 Salix brachista HOM05D008193 ORTHO05D010324 2.5e-19 99.0 83 63.9
AL6G41420 Arabidopsis lyrata HOM05D008193 ORTHO05D010324 4.3e-19 98.2 59 79.7
MBI07_g31516_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 2.8e-18 95.5 59 78.0
SHI35587 Sapria himalayana HOM05D008193 ORTHO05D010324 4.0e-17 91.7 79 60.8
SHI16089 Sapria himalayana HOM05D008193 ORTHO05D010324 2.9e-15 85.5 66 65.2
Sc11g0004460 Simmondsia chinensis HOM05D008193 ORTHO05D010324 1.4e-14 83.2 49 79.6
MELO3C021560.2 Cucumis melo HOM05D008193 ORTHO05D010324 2.7e-13 79.0 52 76.9
SMO364G0207 Selaginella moellendorffii HOM05D008193 ORTHO05D002596 5.6e-11 71.2 97 32.0
SHI46986 Sapria himalayana HOM05D008193 ORTHO05D010324 4.7e-10 68.2 53 60.4
SHI29515 Sapria himalayana HOM05D049097 ORTHO05D010324 1.4e-09 66.6 43 72.1


User provided reference genes

Program Settings