Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 1.2e-52 209.5 102 100.0
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 2.6e-52 208.4 102 99.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 8.5e-51 203.4 102 96.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 5.2e-48 194.1 102 92.2
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 5.0e-35 151.0 99 77.8
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 3.6e-33 144.8 98 76.5
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 6.1e-33 144.1 99 73.7
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 8.0e-33 143.7 103 71.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.0e-32 143.3 100 75.0
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.0e-32 143.3 99 74.7
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.8e-32 142.5 99 74.7
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 4.0e-32 141.4 97 73.2
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 4.0e-32 141.4 99 74.7
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 6.8e-32 140.6 98 74.5
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 8.8e-32 140.2 99 72.7
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.2e-31 139.8 99 72.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 4.4e-31 137.9 98 72.4
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.4e-31 137.9 99 70.7
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.7e-31 137.5 98 71.4
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 5.7e-31 137.5 98 71.4
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 5.7e-31 137.5 98 71.4
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.8e-30 135.2 98 72.4
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 6.3e-30 134.0 100 69.0
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 8.3e-30 133.7 100 67.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 8.3e-30 133.7 98 70.4
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.1e-29 133.3 98 68.4
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.4e-29 132.9 100 66.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.8e-29 132.5 98 70.4
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.8e-29 132.5 100 70.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 2.4e-29 132.1 98 67.3
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 2.4e-29 132.1 98 71.4
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 4.1e-29 131.3 98 69.4
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 5.4e-29 131.0 96 70.8
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 7.0e-29 130.6 94 69.1
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 9.1e-29 130.2 99 67.7
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.2e-28 129.8 98 65.3
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 3.5e-28 128.3 103 66.0
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 4.5e-28 127.9 100 68.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 4.5e-28 127.9 98 69.4
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 4.5e-28 127.9 98 69.4
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 5.9e-28 127.5 103 65.0
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 7.7e-28 127.1 99 66.7
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 7.7e-28 127.1 99 69.7
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 7.7e-28 127.1 95 69.5
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 7.7e-28 127.1 98 67.3
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 7.7e-28 127.1 100 67.0
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.0e-27 126.7 97 68.0
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 1.0e-27 126.7 102 65.7
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 1.0e-27 126.7 98 65.3
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 1.3e-27 126.3 103 65.0
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.3e-27 126.3 94 70.2
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 2.3e-27 125.6 102 66.7
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 3.8e-27 124.8 94 67.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 3.8e-27 124.8 98 67.3
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 3.8e-27 124.8 99 64.6
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 2.5e-26 122.1 101 69.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 3.3e-26 121.7 94 66.0
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 3.3e-26 121.7 104 64.4
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 9.5e-26 120.2 95 69.5
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 1.2e-25 119.8 98 63.3
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.8e-25 118.6 98 65.3
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.7e-25 117.9 100 61.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 4.7e-25 117.9 100 61.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 8.0e-25 117.1 100 61.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.0e-24 116.7 98 64.3
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.0e-24 116.7 103 64.1
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 1.0e-24 116.7 94 64.9
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 1.4e-24 116.3 97 62.9
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-24 116.3 100 62.0
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.4e-24 116.3 100 62.0
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 2.3e-24 115.5 87 72.4
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 4.0e-24 114.8 100 61.0
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 4.0e-24 114.8 100 61.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 5.2e-24 114.4 97 62.9
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 5.2e-24 114.4 101 64.4
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 6.8e-24 114.0 101 69.3
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 8.9e-24 113.6 97 60.8
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.4e-23 111.3 97 60.8
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 7.5e-23 110.5 98 58.2
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 6.3e-22 107.5 89 64.0
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.8e-21 105.9 99 57.6
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 2.4e-21 105.5 98 55.1
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 2.4e-21 105.5 96 58.3
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 4.1e-21 104.8 100 59.0
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.2e-20 103.2 100 57.0
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.6e-20 102.8 100 57.0
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.6e-20 102.8 100 57.0
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.0e-20 102.4 100 57.0
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 3.5e-20 101.7 97 59.8
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 2.3e-19 99.0 100 55.0
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 2.9e-19 98.6 78 62.8
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-18 96.3 90 60.0
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.4e-16 89.7 87 58.6
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 2.3e-16 89.0 75 64.0
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.3e-16 89.0 97 51.5
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 8.9e-16 87.0 71 64.8
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-13 80.1 94 52.1
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 3.2e-13 78.6 80 55.0
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 4.7e-09 64.7 102 42.2
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 6.2e-09 64.3 62 56.5
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.5e-07 59.7 105 37.1


User provided reference genes

Program Settings