Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 3.0e-108 395.2 203 100.0
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.1e-102 376.7 203 97.0
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.9e-81 306.2 226 77.0
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 4.0e-68 261.9 193 75.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 5.2e-68 261.5 195 76.4
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.2e-67 260.4 195 70.3
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 1.7e-63 246.5 185 70.8
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.5e-62 243.4 172 75.0
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 1.9e-62 243.0 172 74.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 9.6e-62 240.7 198 68.7
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 3.6e-61 238.8 163 71.8
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 6.2e-61 238.0 153 77.8
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 6.2e-61 238.0 205 62.9
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.1e-60 237.3 155 77.4
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.1e-60 237.3 156 76.3
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.4e-60 236.9 175 72.6
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.4e-60 236.9 173 72.8
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.4e-60 236.1 164 72.6
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 2.4e-60 236.1 177 71.8
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 3.1e-60 235.7 156 78.2
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.0e-60 235.3 180 71.7
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 5.2e-60 235.0 171 74.9
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 6.8e-60 234.6 156 75.0
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 6.8e-60 234.6 152 80.9
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 8.9e-60 234.2 164 72.6
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.2e-59 233.8 169 72.2
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.2e-59 233.8 180 71.1
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.5e-59 233.4 147 79.6
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.5e-59 233.4 180 71.1
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.0e-59 233.0 164 70.1
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 2.0e-59 233.0 157 73.2
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 2.6e-59 232.6 151 77.5
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.6e-59 232.6 176 69.9
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 2.6e-59 232.6 205 61.5
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 3.4e-59 232.3 153 77.1
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 5.8e-59 231.5 159 78.0
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 5.8e-59 231.5 190 68.4
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 9.9e-59 230.7 170 73.5
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 9.9e-59 230.7 156 75.6
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.3e-58 230.3 195 64.6
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.9e-58 229.2 155 78.1
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 4.9e-58 228.4 150 76.7
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 6.4e-58 228.0 171 67.3
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 1.1e-57 227.3 150 76.7
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.4e-57 226.9 172 70.9
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.4e-57 226.9 141 80.9
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.9e-57 226.5 172 71.5
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.4e-57 226.1 140 82.1
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 4.2e-57 225.3 203 60.6
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 5.4e-57 224.9 151 77.5
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 5.4e-57 224.9 143 81.1
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 7.1e-57 224.6 191 62.8
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.2e-56 223.8 150 76.0
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.6e-56 223.4 150 76.0
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.1e-56 223.0 151 75.5
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.1e-56 223.0 150 75.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 2.7e-56 222.6 179 67.6
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 2.7e-56 222.6 186 67.7
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 3.5e-56 222.2 146 76.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.5e-56 222.2 146 76.7
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 3.5e-56 222.2 146 76.7
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 3.5e-56 222.2 176 68.2
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 4.6e-56 221.9 189 64.6
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.0e-55 220.7 197 60.9
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.7e-55 219.9 138 79.0
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 3.9e-55 218.8 194 60.3
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 6.6e-55 218.0 156 73.1
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 2.5e-54 216.1 168 66.7
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 2.5e-54 216.1 164 68.3
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.6e-54 214.9 203 58.1
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 5.6e-54 214.9 159 72.3
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 5.6e-54 214.9 165 70.3
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.3e-54 214.5 159 71.1
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 9.6e-54 214.2 124 84.7
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.6e-53 213.4 139 75.5
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 4.8e-53 211.8 149 72.5
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 4.8e-53 211.8 190 60.5
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.3e-52 208.4 203 57.1
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 2.6e-51 206.1 152 72.4
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 5.8e-51 204.9 164 68.3
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.7e-50 203.4 128 78.1
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 3.8e-50 202.2 143 75.5
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.9e-49 199.9 201 59.7
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 3.2e-49 199.1 121 80.2
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.2e-48 197.2 145 73.1
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.3e-47 193.0 128 70.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 3.0e-47 192.6 131 72.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 3.1e-44 182.6 101 90.1
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.1e-41 174.1 169 56.8
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.2e-41 172.6 144 66.0
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 4.6e-40 168.7 97 87.6
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 7.9e-40 167.9 119 68.1
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 1.8e-39 166.8 107 78.5
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 8.7e-39 164.5 101 84.2
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 7.4e-38 161.4 110 75.5
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 7.4e-38 161.4 150 62.0
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.3e-37 160.6 105 80.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.5e-35 153.7 99 75.8
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.7e-34 150.2 101 76.2
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.3e-31 140.6 102 70.6
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.3e-31 140.6 155 50.3
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 2.3e-31 139.8 137 51.8
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 2.5e-30 136.3 103 68.9
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 5.7e-30 135.2 187 45.5
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 4.8e-29 132.1 79 83.5
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 2.4e-28 129.8 186 45.2
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.6e-24 117.1 71 87.3
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.6e-24 117.1 71 87.3
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 8.7e-23 111.3 78 71.8
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 8.2e-21 104.8 136 48.5
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 8.2e-21 104.8 61 83.6
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.5e-19 100.5 68 69.1
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.7e-19 98.2 70 70.0
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.1e-16 90.1 109 41.3
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.3e-10 70.9 39 82.1
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.3e-10 70.9 39 82.1


User provided reference genes

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