Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-281 971.8 498 100.0
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.0e-226 788.5 502 81.5
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.8e-200 702.2 411 88.1
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-173 611.7 578 62.1
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.6e-172 608.2 578 61.9
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-88 330.1 426 43.0
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.3e-83 312.4 483 41.0
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.8e-78 297.0 420 37.9
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.1e-78 295.8 450 36.9
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.0e-78 295.4 372 41.4
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 5.8e-68 262.7 360 40.3
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 7.0e-66 255.8 386 35.0
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 3.5e-65 253.4 442 33.9
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 6.6e-64 249.2 377 35.8
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.3e-61 240.7 273 47.6
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 6.8e-61 239.2 398 35.4
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.5e-60 235.7 302 44.0
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-58 231.5 329 43.2
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.9e-58 231.1 416 34.9
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 9.5e-55 218.8 384 34.1
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.7e-54 216.5 286 40.9
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 1.8e-53 214.5 370 32.4
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.2e-53 213.0 298 38.6
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 4.4e-52 209.9 294 38.1
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-51 208.0 212 44.3
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-50 204.5 182 48.9
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 1.2e-49 201.8 314 36.6
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 1.6e-49 201.4 185 49.2
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.6e-49 199.9 178 51.1
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 7.8e-49 199.1 320 38.4
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-42 177.9 153 52.9
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.2e-41 175.3 171 47.4
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 5.3e-37 159.8 205 40.0
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-35 154.8 200 40.5
Sed0007767 Sechium edule HOM05D007588 ORTHO05D001339 8.4e-35 152.5 437 26.8
MELO3C029369.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.4e-34 151.0 430 29.1
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 3.2e-34 150.6 256 35.5
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 3.2e-34 150.6 430 26.7
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.5e-33 147.1 139 49.6
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.7e-32 142.5 128 53.1
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 2.5e-31 141.0 150 43.3
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.0e-29 133.7 129 45.0
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 5.3e-29 133.3 153 37.3
MELO3C027442.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-28 131.3 292 29.5
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 4.5e-28 130.2 380 26.3
Sed0015279 Sechium edule HOM05D007588 ORTHO05D001339 7.1e-26 122.9 377 24.9
ClCG10G006620 Citrullus lanatus HOM05D007588 ORTHO05D001339 7.9e-25 119.4 264 31.1
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 6.7e-24 116.3 304 26.0
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 7.4e-23 112.8 356 25.3
Sed0008385 Sechium edule HOM05D007588 ORTHO05D001339 4.8e-22 110.2 240 32.5
Sed0000745 Sechium edule HOM05D007588 ORTHO05D001339 6.2e-22 109.8 228 32.9
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.1e-21 109.0 117 43.6
Sed0017408 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-21 109.0 223 31.4
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-20 104.4 302 25.8
ClCG06G009500 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.4e-20 104.0 162 31.5
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-19 102.1 187 32.1
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-19 100.9 115 40.0
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.9e-19 100.1 202 29.7
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 4.9e-19 100.1 191 31.4
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.1e-18 99.0 481 24.7
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-18 97.1 223 28.3
MELO3C032040.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.3e-18 95.9 111 44.1
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-18 95.9 289 24.6
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-18 95.9 172 28.5
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 9.3e-18 95.9 172 29.7
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.2e-17 95.5 360 25.6
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-17 94.4 172 29.1
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-17 93.6 334 24.9
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-17 93.6 174 31.0
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-17 93.6 152 31.6
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-17 92.8 191 29.8
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 7.9e-17 92.8 150 30.0
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 1.0e-16 92.4 172 28.5
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.3e-16 92.0 162 34.0
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.8e-16 91.7 369 23.0
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.3e-16 91.3 127 33.9
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 2.3e-16 91.3 100 43.0
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 3.9e-16 90.5 81 50.6
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 6.7e-16 89.7 154 31.8
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-15 89.0 170 28.8
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.5e-15 88.6 165 27.9
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 1.5e-15 88.6 150 29.3
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-15 88.6 269 26.8
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.9e-15 88.2 160 28.8
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-15 87.8 170 28.8
ClCG08G006830 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.3e-15 87.0 130 37.7
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-15 87.0 168 29.2
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-15 87.0 164 29.3
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-15 86.7 167 27.5
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-15 86.7 170 28.8
ClCG00G005620 Citrullus lanatus HOM05D014232 ORTHO05D001339 7.4e-15 86.3 393 22.4
ClCG06G011820 Citrullus lanatus HOM05D014232 ORTHO05D001339 7.4e-15 86.3 393 22.4
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 7.4e-15 86.3 150 32.0
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 9.6e-15 85.9 243 28.8
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 1.6e-14 85.1 258 25.6
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.1e-14 84.7 484 22.3
MELO3C004723.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.3e-14 83.2 105 37.1
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-14 83.2 170 27.6
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-14 83.2 164 29.3
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 8.2e-14 82.8 170 27.6
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-13 82.4 155 27.1
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 1.4e-13 82.0 287 24.7
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-13 82.0 105 33.3
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 2.4e-13 81.3 150 28.7
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-13 81.3 168 28.6
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-13 81.3 142 33.1
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-13 80.9 150 26.7
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 3.1e-13 80.9 146 28.8
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 4.1e-13 80.5 94 37.2
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-13 80.5 158 27.2
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-13 80.5 167 27.5
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-13 79.7 421 23.3
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 9.0e-13 79.3 160 26.9
MELO3C020247.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.0e-13 79.3 168 31.5
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 1.2e-12 79.0 140 28.6
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-12 79.0 158 27.8
ClCG10G007440 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.0e-12 78.2 148 25.7
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-12 78.2 139 28.1
Sed0000711 Sechium edule HOM05D048706 ORTHO05D001339 2.0e-12 78.2 175 31.4
ClCG07G010540 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.6e-12 77.8 72 48.6
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-12 77.4 153 29.4
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 3.4e-12 77.4 156 27.6
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 4.5e-12 77.0 135 29.6
MELO3C004097.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.9e-12 76.6 106 34.9
MELO3C033167.2 Cucumis melo HOM05D000877 ORTHO05D001339 1.0e-11 75.9 87 41.4
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-11 75.9 172 26.7
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-11 75.5 141 33.3
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.7e-11 75.1 269 24.9
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-11 75.1 284 24.6
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 2.2e-11 74.7 141 29.1
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-11 74.3 164 28.7
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-11 74.3 261 25.7
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 3.8e-11 73.9 153 25.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 3.8e-11 73.9 103 37.9
Sed0014331 Sechium edule HOM05D007588 ORTHO05D001339 3.8e-11 73.9 107 34.6
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-11 72.8 152 28.3
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 1.4e-10 72.0 188 26.6
Sed0013444 Sechium edule HOM05D007588 ORTHO05D001339 3.2e-10 70.9 102 35.3
ClCG04G001010 Citrullus lanatus HOM05D009184 ORTHO05D015610 4.2e-10 70.5 101 33.7
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.2e-10 70.5 57 49.1
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 4.2e-10 70.5 164 25.0
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 5.5e-10 70.1 292 25.0
CsaV3_2G008180 Cucumis sativus L. HOM05D007588 ORTHO05D001339 5.5e-10 70.1 90 38.9
Sed0010098 Sechium edule HOM05D007588 ORTHO05D001339 9.3e-10 69.3 105 38.1
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-09 68.9 218 29.4
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-09 68.6 128 28.9
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.7e-09 67.8 63 49.2
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 4.6e-09 67.0 85 35.3
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 65.9 117 30.8
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-08 65.9 81 33.3
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-08 65.5 82 34.1
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 2.3e-08 64.7 68 39.7
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-08 64.7 111 32.4
MELO3C012892.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.0e-08 64.3 59 49.2
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-08 63.9 116 29.3
Lj2P897T21 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-08 63.5 88 30.7
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-07 62.4 91 33.0
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-07 62.0 83 32.5
MELO3C002855.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.9e-07 61.6 55 43.6
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 2.5e-07 61.2 156 26.3
CSS0049109 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 3.3e-07 60.8 229 22.3
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-07 60.8 233 24.9
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-07 60.5 87 31.0
CSS0038789 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 5.7e-07 60.1 230 22.2
ClCG08G003110 Citrullus lanatus HOM05D007588 ORTHO05D001339 5.7e-07 60.1 65 33.8
MELO3C026648.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.7e-07 60.1 104 33.7
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-07 59.3 87 29.9
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 9.7e-07 59.3 177 26.6
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 9.7e-07 59.3 104 32.7
Sed0000544 Sechium edule HOM05D007588 ORTHO05D001339 9.7e-07 59.3 78 32.1
ClCG07G007130 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.3e-06 58.9 61 39.3
CSS0039691 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.6e-06 58.5 75 36.0
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-06 58.5 127 26.8
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-06 57.4 291 23.0
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-06 56.6 73 37.0


User provided reference genes

Program Settings