Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 4.8e-77 291.2 157 100.0
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 4.8e-53 211.5 153 79.7
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.2e-50 202.6 157 75.2
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 7.2e-49 197.6 156 75.0
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.4e-44 183.3 147 69.4
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 3.2e-41 172.2 147 67.3
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 5.5e-41 171.4 147 66.7
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 7.2e-41 171.0 144 68.1
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 7.2e-41 171.0 147 65.3
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.2e-40 170.2 158 64.6
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 2.1e-40 169.5 158 64.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.7e-40 169.1 150 66.0
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.7e-40 169.1 152 65.1
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.7e-40 169.1 157 65.6
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 6.1e-40 167.9 152 65.8
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 6.1e-40 167.9 166 61.4
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 7.9e-40 167.5 147 65.3
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 7.9e-40 167.5 156 62.8
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 7.9e-40 167.5 147 65.3
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 1.8e-39 166.4 151 63.6
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 3.0e-39 165.6 146 64.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 3.9e-39 165.2 147 63.9
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 3.9e-39 165.2 156 62.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 5.2e-39 164.9 158 62.7
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 8.8e-39 164.1 158 62.0
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 8.8e-39 164.1 144 65.3
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 8.8e-39 164.1 147 65.3
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 2.6e-38 162.5 143 65.7
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 2.6e-38 162.5 153 63.4
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 4.4e-38 161.8 155 61.9
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 7.4e-38 161.0 144 64.6
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 7.4e-38 161.0 144 67.4
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 9.7e-38 160.6 146 63.7
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.3e-37 160.2 146 63.7
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 2.2e-37 159.5 140 67.1
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 2.2e-37 159.5 136 69.1
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.8e-37 159.1 116 77.6
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 4.8e-37 158.3 110 79.1
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 6.3e-37 157.9 156 59.0
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 6.3e-37 157.9 155 62.6
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.3e-37 157.9 146 63.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 8.2e-37 157.5 156 62.2
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 8.2e-37 157.5 144 63.2
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 8.2e-37 157.5 106 81.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.2e-37 157.5 146 61.6
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.1e-36 157.1 147 61.9
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.1e-36 157.1 157 58.0
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.4e-36 156.8 149 63.8
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.4e-36 156.8 149 63.8
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.8e-36 156.4 116 75.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.8e-36 156.4 144 63.2
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 2.4e-36 156.0 128 70.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.4e-36 156.0 146 61.0
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 3.1e-36 155.6 106 79.2
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.3e-36 154.8 109 79.8
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 5.3e-36 154.8 109 76.1
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 7.0e-36 154.5 150 60.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 7.0e-36 154.5 150 60.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 7.0e-36 154.5 150 60.0
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.0e-36 154.5 97 84.5
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 9.1e-36 154.1 143 62.2
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 9.1e-36 154.1 143 62.2
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 1.6e-35 153.3 146 61.6
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.6e-35 153.3 147 61.2
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 2.6e-35 152.5 151 60.3
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.5e-35 152.1 151 62.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 4.5e-35 151.8 147 60.5
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 5.9e-35 151.4 144 63.2
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 7.7e-35 151.0 107 76.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.3e-34 150.2 147 59.9
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.3e-34 150.2 113 70.8
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 2.2e-34 149.4 119 68.1
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 2.9e-34 149.1 106 76.4
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 3.8e-34 148.7 116 71.6
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 5.0e-34 148.3 117 67.5
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 6.5e-34 147.9 117 66.7
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 6.5e-34 147.9 117 66.7
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.5e-33 146.7 118 68.6
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.5e-33 146.7 118 68.6
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 3.2e-33 145.6 113 69.9
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 7.2e-33 144.4 141 59.6
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.6e-32 143.3 111 70.3
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.7e-32 142.5 108 75.0
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 4.7e-32 141.7 109 71.6
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 3.0e-31 139.0 133 60.2
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 5.2e-31 138.3 144 57.6
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.3e-29 133.7 158 51.9
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.2e-29 132.9 107 65.4
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.4e-28 129.4 110 65.5
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 5.3e-28 128.3 118 62.7
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 4.5e-27 125.2 150 51.3
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.3e-26 123.6 122 63.1
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 3.8e-26 122.1 113 59.3
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.0e-26 121.7 108 65.7
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 9.4e-25 117.5 107 65.4
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 2.7e-24 115.9 109 61.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.7e-24 115.9 99 63.6
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.6e-24 115.5 142 54.9
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.2e-23 111.7 109 58.7
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 4.1e-20 102.1 115 55.7
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.2e-19 100.5 63 79.4
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 2.3e-18 96.3 67 76.1
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 7.2e-17 91.3 94 59.6
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.2e-14 84.0 145 37.2
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-14 81.3 97 44.3
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.2e-11 73.9 51 80.4
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 2.0e-11 73.2 101 43.6
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 4.7e-08 62.0 55 60.0
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 1.4e-07 60.5 52 61.5


User provided reference genes

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