Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023320.2 Cucumis melo HOM05D006691 ORTHO05D007620 1.4e-44 182.6 92 100.0
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 2.7e-40 168.3 92 93.5
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 2.3e-31 138.7 95 78.9
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 1.2e-30 136.3 92 79.3
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 3.2e-17 91.7 94 57.4
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 8.0e-16 87.0 92 52.2
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 8.0e-16 87.0 91 51.6
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 1.0e-15 86.7 93 54.8
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 1.8e-15 85.9 91 54.9
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 1.8e-15 85.9 93 51.6
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.0e-15 85.1 93 53.8
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 5.2e-15 84.3 88 52.3
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 8.8e-15 83.6 83 51.8
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.5e-14 82.8 98 50.0
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.5e-14 82.8 98 50.0
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 2.0e-14 82.4 103 49.5
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 3.4e-14 81.6 91 51.6
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 4.4e-14 81.3 83 50.6
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 7.5e-14 80.5 93 49.5
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 9.8e-14 80.1 88 52.3
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 9.8e-14 80.1 94 55.3
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 1.7e-13 79.3 96 51.0
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 2.2e-13 79.0 83 56.6
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 2.2e-13 79.0 91 49.5
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 2.8e-13 78.6 85 47.1
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 4.9e-13 77.8 92 51.1
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.9e-13 77.8 83 55.4
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 6.3e-13 77.4 83 51.8
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 6.3e-13 77.4 87 54.0
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 6.3e-13 77.4 88 53.4
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 8.3e-13 77.0 83 50.6
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 8.3e-13 77.0 85 55.3
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 8.3e-13 77.0 96 53.1
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 8.3e-13 77.0 93 50.5
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 8.3e-13 77.0 87 50.6
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 1.1e-12 76.6 95 50.5
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 1.1e-12 76.6 95 50.5
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 1.4e-12 76.3 83 53.0
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.8e-12 75.9 83 50.6
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.8e-12 75.9 94 52.1
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 2.4e-12 75.5 93 51.6
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 3.1e-12 75.1 96 52.1
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 4.1e-12 74.7 92 52.2
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 5.4e-12 74.3 88 50.0
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 5.4e-12 74.3 87 47.1
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 7.0e-12 73.9 96 50.0
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 9.2e-12 73.6 87 51.7
HanXRQChr04g0127791 Helianthus annuus HOM05D006691 ORTHO05D007620 1.2e-11 73.2 93 48.4
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 1.6e-11 72.8 97 47.4
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 1.6e-11 72.8 93 46.2
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 2.0e-11 72.4 96 49.0
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 2.0e-11 72.4 83 48.2
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 2.0e-11 72.4 83 47.0
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 2.7e-11 72.0 89 44.9
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.7e-11 72.0 60 61.7
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.7e-11 72.0 99 49.5
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 3.5e-11 71.6 92 50.0
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 3.5e-11 71.6 92 45.7
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 3.5e-11 71.6 99 48.5
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 4.5e-11 71.2 58 62.1
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 5.9e-11 70.9 94 45.7
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 7.8e-11 70.5 39 76.9
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.0e-10 70.1 34 91.2
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 1.7e-10 69.3 85 49.4
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 2.3e-10 68.9 33 87.9
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 2.3e-10 68.9 50 64.0
Lsat_1_v5_gn_7_91560 Lactuca sativa HOM05D006691 ORTHO05D007620 2.9e-10 68.6 86 45.3
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 2.9e-10 68.6 92 44.6
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 3.8e-10 68.2 87 47.1
Carub.0007s0568 Capsella rubella HOM05D006691 ORTHO05D007620 5.0e-10 67.8 94 45.7
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 8.6e-10 67.0 83 41.0
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 8.6e-10 67.0 83 41.0
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 1.5e-09 66.2 102 44.1
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.5e-09 66.2 83 41.0
HanXRQChr16g0505401 Helianthus annuus HOM05D006691 ORTHO05D007620 1.9e-09 65.9 89 42.7
Thhalv10026702m.g Eutrema salsugineum HOM05D006691 ORTHO05D007620 3.3e-09 65.1 87 43.7
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 5.6e-09 64.3 92 42.4
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 7.3e-09 63.9 83 43.4
AL3G52540 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 1.6e-08 62.8 90 44.4
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 1.6e-08 62.8 87 44.8
Carub.0003s3015 Capsella rubella HOM05D006691 ORTHO05D007620 2.8e-08 62.0 87 44.8
AT2G16385 Arabidopsis thaliana HOM05D006691 ORTHO05D007620 4.7e-08 61.2 87 42.5
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 6.1e-08 60.8 93 36.6
MBI10_g00752_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 6.1e-08 60.8 56 53.6
AL7G16600 Arabidopsis lyrata HOM05D006691 ORTHO05D007620 8.0e-08 60.5 94 41.5
A01p03880 Brassica napus HOM05D006691 ORTHO05D007620 8.0e-08 60.5 90 44.4
CARHR242800 Cardamine hirsuta HOM05D006691 ORTHO05D007620 8.0e-08 60.5 90 40.0
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 1.0e-07 60.1 99 42.4
BcaNung00683 Brassica carinata HOM05D006691 ORTHO05D007620 1.0e-07 60.1 90 43.3
C01p04190 Brassica napus HOM05D006691 ORTHO05D007620 1.0e-07 60.1 90 43.3
BraA01t00375Z Brassica rapa HOM05D006691 ORTHO05D007620 2.3e-07 58.9 90 42.2
Glyma.06G010000 Glycine max HOM05D006691 ORTHO05D007620 3.0e-07 58.5 87 36.8
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 3.0e-07 58.5 91 40.7
ATR0585G050 Amborella trichopoda HOM05D006691 ORTHO05D007620 4.0e-07 58.2 90 38.9
BcaNung04921 Brassica carinata HOM05D006691 ORTHO05D007620 4.0e-07 58.2 90 42.2
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 5.2e-07 57.8 51 56.9
C07p60660 Brassica napus HOM05D006691 ORTHO05D007620 8.9e-07 57.0 87 37.9
BolC7t46496H Brassica oleracea HOM05D006691 ORTHO05D007620 8.9e-07 57.0 87 37.9
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 8.9e-07 57.0 39 66.7
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 2.0e-06 55.8 99 38.4
A03p63030 Brassica napus HOM05D006691 ORTHO05D007620 2.0e-06 55.8 87 37.9
BolC3t20851H Brassica oleracea HOM05D006691 ORTHO05D007620 2.0e-06 55.8 87 35.6
BraA03t15377Z Brassica rapa HOM05D006691 ORTHO05D007620 2.0e-06 55.8 87 37.9
Sp7g32390 Schrenkiella parvula HOM05D006691 ORTHO05D007620 4.4e-06 54.7 32 65.6
Lalb_Chr03g0032901 Lupinus albus HOM05D006691 ORTHO05D007620 7.5e-06 53.9 37 59.5
Ah.01g019150 Amaranthus hybridus HOM05D001345 ORTHO05D001190 9.8e-06 53.5 71 47.9
Sc18g0005100 Simmondsia chinensis HOM05D006691 ORTHO05D007620 9.8e-06 53.5 92 34.8


User provided reference genes

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