Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 4.1e-114 414.8 227 100.0
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 2.5e-103 379.0 217 94.0
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 2.4e-98 362.5 217 89.9
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 9.3e-66 254.2 213 68.5
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 7.4e-63 244.6 190 71.1
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 3.7e-62 242.3 220 65.0
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 1.1e-61 240.7 182 69.8
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 1.8e-61 240.0 196 67.3
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.8e-61 240.0 231 65.8
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 5.3e-61 238.4 219 63.5
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 6.9e-61 238.0 211 66.8
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 9.0e-61 237.7 210 65.7
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 1.2e-60 237.3 193 69.4
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 2.0e-60 236.5 224 62.9
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 5.9e-60 235.0 192 70.8
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 5.9e-60 235.0 192 70.8
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 7.7e-60 234.6 188 70.7
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.7e-60 234.6 188 70.7
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.7e-60 234.6 188 70.7
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 1.3e-59 233.8 193 67.9
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 2.2e-59 233.0 199 64.3
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 2.9e-59 232.6 177 70.6
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 3.8e-59 232.3 195 66.7
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 3.8e-59 232.3 212 66.5
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 6.5e-59 231.5 198 64.6
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 8.5e-59 231.1 200 64.5
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 8.5e-59 231.1 194 67.0
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 8.5e-59 231.1 184 70.1
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 4.2e-58 228.8 168 72.0
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 9.4e-58 227.6 222 60.8
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 9.4e-58 227.6 194 66.5
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 1.2e-57 227.3 228 61.0
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.2e-57 227.3 220 61.8
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 1.2e-57 227.3 227 59.9
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.6e-57 226.9 201 64.7
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 2.1e-57 226.5 168 72.0
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.7e-57 226.1 133 86.5
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 2.7e-57 226.1 198 66.2
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 3.6e-57 225.7 160 74.4
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 6.1e-57 224.9 187 67.4
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 7.9e-57 224.6 189 66.7
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 1.0e-56 224.2 196 63.8
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 3.9e-56 222.2 191 68.1
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.5e-55 219.5 185 67.0
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 2.8e-54 216.1 185 66.5
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-54 215.7 263 54.0
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.8e-53 213.4 191 63.9
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 4.1e-53 212.2 207 59.4
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.1e-53 212.2 188 64.4
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 4.1e-53 212.2 191 63.4
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 5.3e-53 211.8 169 68.0
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 2.0e-52 209.9 168 67.3
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 4.5e-52 208.8 216 58.8
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 2.9e-51 206.1 200 61.5
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 6.5e-51 204.9 174 67.2
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 3.2e-50 202.6 180 63.3
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 2.1e-49 199.9 168 64.9
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 6.1e-49 198.4 216 55.6
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 3.1e-45 186.0 135 68.9
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.2e-43 179.9 181 58.0
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 5.5e-42 175.3 199 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 4.0e-40 169.1 162 58.0
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 4.0e-40 169.1 131 64.9
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 3.6e-33 146.0 142 54.2
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 4.7e-33 145.6 84 82.1
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.7e-30 137.1 180 51.1
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.4e-29 134.0 84 78.6
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.4e-29 133.3 135 58.5
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 3.4e-23 112.8 216 40.7
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 3.6e-17 92.8 97 58.8
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 4.4e-15 85.9 49 81.6
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.7e-15 85.5 49 79.6
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 9.8e-15 84.7 58 74.1
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.3e-14 84.3 46 84.8
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 2.2e-14 83.6 47 80.9
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.4e-14 82.0 47 80.9
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 7.0e-13 78.6 47 76.6
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 1.7e-11 73.9 109 37.6
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.7e-11 73.9 47 74.5
Potri.007G105401 Populus trichocarpa HOM05D007927 ORTHO05D010029 1.2e-07 61.2 100 46.0
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.7e-06 56.2 29 89.7


User provided reference genes

Program Settings