Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 7.5e-264 913.3 459 100.0
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 1.4e-222 776.2 573 73.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.5e-195 685.6 563 67.9
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 4.4e-155 552.0 578 55.0
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 4.1e-68 263.1 582 36.6
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 1.2e-64 251.5 573 34.6
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.2e-58 230.7 556 34.0
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.1e-57 228.4 526 34.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.9e-57 227.6 591 34.5
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.5e-57 227.3 557 33.0
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 2.1e-56 224.2 539 32.3
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.0e-54 217.6 532 33.6
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.3e-53 214.9 525 33.1
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.2e-53 214.2 627 30.6
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 8.2e-53 212.2 543 33.0
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.1e-52 211.8 579 33.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 2.0e-51 207.6 565 33.3
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 4.5e-51 206.5 589 32.8
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 1.3e-50 204.9 545 31.2
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.9e-49 201.1 420 36.0
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 4.2e-49 199.9 573 31.2
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 5.5e-49 199.5 602 30.1
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 7.2e-49 199.1 547 30.2
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.1e-48 197.6 572 32.7
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 6.1e-48 196.1 619 30.0
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 8.0e-48 195.7 376 37.0
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.0e-47 195.3 438 35.8
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.4e-47 194.9 408 35.8
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.0e-47 193.7 606 31.5
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 4.0e-47 193.4 397 39.3
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 4.0e-47 193.4 475 33.9
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 4.0e-47 193.4 475 33.9
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 5.2e-47 193.0 573 30.5
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.2e-46 191.8 551 29.0
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.5e-46 191.4 565 31.9
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.5e-46 191.4 606 31.4
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 7.5e-46 189.1 535 30.8
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.7e-45 188.0 619 30.4
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.2e-45 187.6 588 29.4
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 2.8e-45 187.2 401 34.7
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.8e-45 186.4 526 32.3
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.8e-44 184.5 560 32.0
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 3.1e-44 183.7 471 32.7
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 5.3e-44 183.0 425 34.6
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 7.0e-44 182.6 586 31.4
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.6e-43 181.4 506 32.6
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 2.2e-42 177.6 545 31.0
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.2e-42 177.6 407 34.4
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 6.5e-42 176.0 424 34.0
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.5e-41 174.1 407 34.2
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.2e-41 173.7 577 29.5
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 3.2e-41 173.7 570 30.0
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 5.5e-41 172.9 559 30.6
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.2e-40 171.8 558 29.4
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.6e-40 171.4 324 37.0
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.1e-40 171.0 588 28.4
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.0e-39 168.7 357 35.0
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 5.7e-38 162.9 363 36.1
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 1.4e-36 158.3 555 28.6
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.8e-36 157.9 500 29.2
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.2e-35 155.2 299 35.1
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.2e-35 155.2 590 26.9
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 2.7e-35 154.1 453 31.3
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 4.5e-35 153.3 364 34.3
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.3e-34 151.0 543 28.2
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 2.3e-34 151.0 514 28.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 8.6e-34 149.1 384 31.5
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.9e-33 147.9 253 42.3
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.5e-33 147.5 297 38.0
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 8.0e-32 142.5 325 33.5
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.4e-31 141.7 439 30.3
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 3.0e-31 140.6 202 42.1
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 6.8e-31 139.4 287 38.0
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 2.0e-30 137.9 536 27.2
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.0e-30 137.9 317 32.8
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 3.4e-30 137.1 581 26.5
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 5.7e-30 136.3 597 26.0
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 7.5e-30 136.0 320 32.5
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 9.8e-30 135.6 318 33.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 1.3e-29 135.2 318 32.7
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.7e-29 134.8 394 32.2
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 6.3e-29 132.9 546 26.7
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 6.3e-29 132.9 411 29.0
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 8.3e-29 132.5 412 28.9
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 9.2e-28 129.0 322 31.4
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 9.2e-28 129.0 325 31.1
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.5e-27 127.1 268 34.3
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.5e-27 127.1 268 34.3
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 5.9e-27 126.3 96 62.5
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.7e-26 124.8 315 29.8
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.5e-25 121.7 89 67.4
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 2.1e-24 117.9 166 45.2
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 2.8e-24 117.5 276 31.5
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 5.2e-23 113.2 334 30.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 3.4e-22 110.5 90 60.0
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 4.9e-21 106.7 90 58.9
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 8.3e-21 105.9 330 31.8
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 7.8e-19 99.4 483 25.7
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.7e-18 98.2 303 30.0
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.5e-17 95.1 74 59.5
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 2.9e-13 80.9 74 50.0
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 7.0e-12 76.3 100 45.0
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.6e-11 73.6 66 53.0
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.3e-10 71.2 66 60.6
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 4.3e-09 67.0 71 45.1
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.2e-08 65.5 149 36.9


User provided reference genes

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