Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 5.5e-150 534.3 265 100.0
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.3e-103 380.2 198 94.4
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 6.1e-93 344.7 223 78.5
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 3.6e-85 318.9 237 71.3
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 2.3e-39 166.8 221 45.2
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 5.1e-39 165.6 227 47.1
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 8.7e-39 164.9 226 43.4
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.9e-38 163.7 228 43.4
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.6e-38 161.4 225 42.2
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.7e-37 159.5 226 42.9
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 4.8e-37 159.1 215 46.0
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.1e-36 157.9 220 43.6
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.1e-36 157.9 225 41.8
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.4e-36 157.5 226 42.5
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.8e-36 157.1 215 45.1
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 9.0e-36 154.8 215 45.6
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.2e-35 154.5 215 44.2
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-35 154.5 218 45.0
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 1.5e-35 154.1 223 43.0
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.5e-35 154.1 227 43.6
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.4e-35 152.9 229 43.7
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 5.8e-35 152.1 226 40.3
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 7.6e-35 151.8 228 43.9
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 7.6e-35 151.8 228 43.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 3.8e-34 149.4 227 44.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 3.8e-34 149.4 224 41.1
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.4e-33 147.5 236 40.7
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.9e-33 147.1 216 45.8
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 9.3e-33 144.8 215 40.5
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 1.6e-32 144.1 214 42.1
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.7e-32 143.3 215 42.3
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 6.0e-32 142.1 211 40.8
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.3e-31 141.0 226 42.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.8e-31 140.6 223 41.3
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 3.9e-31 139.4 241 38.6
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 8.7e-31 138.3 223 41.7
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.1e-30 137.9 211 39.8
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.5e-30 136.7 191 42.4
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 3.7e-29 132.9 240 39.2
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 1.1e-28 131.3 255 35.3
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.4e-28 130.2 228 41.7
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 4.0e-28 129.4 214 38.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 5.3e-28 129.0 241 39.4
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.3e-28 129.0 241 39.8
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.0e-28 128.3 241 38.6
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.2e-27 127.9 241 39.0
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.5e-27 127.5 240 39.2
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 3.4e-27 126.3 219 38.8
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.7e-26 124.0 222 39.2
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 2.2e-26 123.6 205 40.5
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.9e-26 123.2 245 35.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 5.0e-26 122.5 233 38.2
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 8.4e-26 121.7 230 38.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.1e-25 121.3 205 38.5
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.9e-25 120.6 219 39.7
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 1.9e-25 120.6 224 38.8
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.5e-25 120.2 205 39.0
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 3.2e-25 119.8 199 39.2
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.5e-25 119.0 229 38.9
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.2e-24 117.9 236 39.0
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.6e-24 117.5 229 38.4
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.6e-24 117.5 216 34.7
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 3.5e-24 116.3 238 36.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.0e-23 114.8 192 39.6
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 3.0e-23 113.2 237 35.4
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 1.1e-22 111.3 209 37.8
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.5e-22 110.9 207 37.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.3e-22 109.8 213 38.5
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.3e-22 109.8 213 38.5
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 7.4e-22 108.6 230 37.8
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.6e-21 107.5 211 36.5
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 2.8e-21 106.7 223 33.2
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 4.8e-21 105.9 236 35.2
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 6.3e-21 105.5 181 40.9
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.1e-20 104.8 232 35.3
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-20 104.8 211 33.2
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.1e-20 104.8 204 35.8
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.2e-19 101.3 236 35.6
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.2e-19 101.3 204 35.8
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.5e-19 100.9 204 34.3
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.5e-19 100.9 204 34.3
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 3.4e-19 99.8 219 36.1
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.9e-19 99.0 204 35.3
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 6.5e-18 95.5 263 28.9
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 6.5e-18 95.5 217 34.6
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.4e-17 94.4 226 33.6
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 1.4e-17 94.4 209 33.5
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 4.2e-17 92.8 224 32.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 4.6e-16 89.4 207 36.2
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.0e-15 86.7 179 36.3
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 5.7e-14 82.4 211 35.5
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 7.4e-14 82.0 201 35.3
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.1e-12 78.2 223 34.1
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 3.4e-11 73.2 109 41.3
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.3e-10 71.2 205 32.7
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 3.2e-09 66.6 217 32.7
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 9.4e-09 65.1 167 32.3
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 1.6e-08 64.3 181 30.4
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 1.6e-08 64.3 181 30.4
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.4e-07 61.2 146 37.7
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 2.3e-07 60.5 219 30.1
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 5.7e-06 55.8 172 29.7


User provided reference genes

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