Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 4.6e-288 993.8 483 100.0
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 2.4e-276 954.9 483 97.1
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 2.0e-259 898.7 476 92.6
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 4.2e-249 864.4 478 88.9
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 7.7e-211 737.3 478 76.4
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.8e-204 716.1 480 73.3
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 2.4e-204 715.7 482 73.9
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 3.5e-203 711.8 480 72.3
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 7.8e-203 710.7 475 73.7
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 7.8e-203 710.7 479 72.7
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 1.3e-202 709.9 466 74.5
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 1.7e-202 709.5 470 73.6
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 2.3e-202 709.1 477 72.5
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 5.0e-202 708.0 473 72.9
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 1.5e-201 706.4 479 72.0
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 1.5e-201 706.4 477 72.3
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 9.5e-201 703.7 473 72.5
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 2.8e-200 702.2 467 73.0
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 3.6e-200 701.8 474 71.7
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 6.1e-200 701.0 481 71.3
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 1.0e-199 700.3 487 71.3
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.0e-199 700.3 472 72.9
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 1.8e-199 699.5 480 71.5
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 1.8e-199 699.5 469 72.5
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 6.8e-199 697.6 481 71.3
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 8.9e-199 697.2 472 71.6
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.0e-198 696.0 473 71.7
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 2.0e-198 696.0 475 71.4
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 1.3e-197 693.3 479 71.0
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.2e-197 692.6 471 71.8
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 4.9e-197 691.4 475 71.2
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 4.9e-197 691.4 484 70.7
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 8.3e-197 690.6 479 72.7
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 1.1e-196 690.3 480 70.8
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 1.1e-196 690.3 471 69.9
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.4e-196 689.9 466 71.0
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.4e-196 689.9 471 71.3
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.2e-195 686.8 483 71.6
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 1.6e-195 686.4 469 72.1
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 3.5e-195 685.3 481 69.2
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 3.5e-195 685.3 475 71.8
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 4.6e-195 684.9 480 70.8
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 6.0e-195 684.5 475 68.4
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 3.0e-194 682.2 477 70.0
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 3.3e-193 678.7 458 72.7
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 1.6e-192 676.4 478 69.9
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 1.6e-192 676.4 480 69.6
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 2.8e-192 675.6 467 70.7
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 3.6e-192 675.2 473 71.9
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 3.6e-192 675.2 474 69.6
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 6.2e-192 674.5 429 77.2
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 2.6e-190 669.1 476 68.9
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 5.8e-190 667.9 467 68.3
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.7e-189 666.4 445 73.3
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 4.9e-189 664.8 471 70.1
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 6.4e-189 664.5 440 73.4
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 2.4e-188 662.5 464 70.7
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 3.2e-188 662.1 479 67.2
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 2.1e-187 659.4 472 68.6
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 2.7e-187 659.1 471 69.0
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 4.6e-187 658.3 480 68.8
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.3e-186 656.8 453 71.7
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 1.3e-186 656.8 472 69.1
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 2.8e-184 649.0 468 68.4
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 8.1e-184 647.5 474 68.6
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 1.8e-183 646.4 468 68.8
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 2.3e-183 646.0 474 68.4
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 2.0e-182 642.9 473 68.7
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 7.5e-182 641.0 466 69.5
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 1.1e-180 637.1 432 73.4
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 3.2e-180 635.6 476 67.2
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 5.4e-180 634.8 469 68.4
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 5.4e-180 634.8 477 67.1
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 7.1e-180 634.4 480 67.3
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 9.2e-180 634.0 473 68.7
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.2e-179 633.6 476 67.2
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 2.7e-179 632.5 476 66.4
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 4.6e-179 631.7 477 66.9
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 6.0e-179 631.3 477 67.3
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 1.3e-178 630.2 477 66.5
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 2.3e-178 629.4 549 59.7
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 3.9e-178 628.6 469 68.4
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 3.9e-178 628.6 472 67.6
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 6.6e-178 627.9 476 66.4
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 1.5e-177 626.7 471 66.7
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 1.5e-177 626.7 471 66.7
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 3.3e-177 625.5 469 67.8
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 4.3e-177 625.2 471 67.1
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 4.7e-176 621.7 427 70.0
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 4.7e-176 621.7 472 67.6
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 1.4e-175 620.2 471 66.0
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 1.2e-174 617.1 471 66.2
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.1e-172 610.5 461 66.2
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 3.2e-172 609.0 497 62.4
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 5.1e-170 601.7 473 65.1
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.1e-169 600.5 517 59.0
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 1.9e-169 599.7 467 64.5
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 5.6e-169 598.2 415 69.2
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 1.6e-168 596.7 471 64.5
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.1e-168 596.3 473 64.9
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 1.5e-166 590.1 444 66.4
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 7.6e-166 587.8 529 59.4
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 4.2e-164 582.0 481 63.8
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 1.0e-162 577.4 417 67.9
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 5.1e-162 575.1 475 62.3
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 3.4e-158 562.4 474 62.4
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 3.8e-157 558.9 367 72.5
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 5.4e-156 555.1 470 62.3
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 6.2e-152 541.6 513 56.5
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 4.0e-151 538.9 408 66.4
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 1.2e-150 537.3 484 57.6
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 9.3e-148 527.7 343 71.7
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 2.1e-144 516.5 490 57.3
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 6.2e-144 515.0 473 57.5
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.3e-143 511.9 469 59.3
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.8e-141 505.8 363 67.2
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.8e-130 470.3 479 54.5
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 8.8e-130 468.0 471 51.8
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.1e-124 451.1 546 46.0
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.2e-115 421.0 468 50.6
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 2.0e-105 387.1 234 79.5
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.2e-101 373.6 329 61.4
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 1.2e-99 367.9 270 66.7
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 9.8e-97 358.2 306 60.5
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 7.0e-87 325.5 477 41.3
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 7.3e-84 315.5 385 45.7
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 6.1e-83 312.4 284 61.3
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.2e-78 298.1 203 67.5
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 2.1e-75 287.3 488 36.1
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.7e-72 277.7 248 59.7
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 4.6e-70 269.6 269 56.1
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 1.8e-66 257.7 460 37.4
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 2.3e-66 257.3 509 35.4
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 1.1e-60 238.4 457 36.1
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.8e-59 233.8 273 46.5
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 5.6e-52 209.5 297 43.1
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 1.3e-51 208.4 209 51.2
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 5.8e-49 199.5 198 51.0
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 9.9e-49 198.7 167 58.7
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 3.2e-47 193.7 201 51.2
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 4.8e-43 179.9 182 53.8
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 9.0e-42 175.6 111 76.6
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.5e-41 174.9 111 76.6
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.6e-41 174.1 111 75.7
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 5.4e-39 166.4 107 74.8
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 1.5e-36 158.3 120 61.7
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 1.2e-33 148.7 122 59.0
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 5.8e-33 146.4 319 32.3
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 7.6e-33 146.0 111 65.8
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 1.7e-32 144.8 113 66.4
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 2.7e-30 137.5 92 66.3
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 5.1e-29 133.3 106 60.4
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.3e-28 130.6 67 92.5
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 9.3e-23 112.5 125 52.0
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 1.9e-20 104.8 69 69.6
Hma1.2p1_0035F.1_g022190 Hydrangea macrophylla HOM05D004406 ORTHO05D005660 1.9e-15 88.2 58 72.4
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 2.1e-14 84.7 97 50.5
SEGI_01378 Sequoiadendron giganteum HOM05D000678 ORTHO05D001709 7.7e-09 66.2 39 84.6


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