Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 8.1e-83 310.5 167 100.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.5e-76 289.7 169 92.9
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 2.6e-65 252.3 169 79.3
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.9e-60 236.1 139 89.9
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 9.3e-39 164.1 170 55.3
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.9e-36 156.4 170 57.1
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 6.3e-35 151.4 171 57.9
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 6.3e-35 151.4 167 55.7
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 8.2e-35 151.0 167 53.9
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 4.1e-34 148.7 168 55.4
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.5e-33 146.7 168 56.0
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.5e-33 146.7 167 56.3
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.6e-33 146.0 169 53.3
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.8e-32 142.1 170 52.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 6.5e-32 141.4 168 52.4
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.1e-31 140.6 184 52.2
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.5e-31 138.3 175 52.6
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 9.4e-31 137.5 141 57.4
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 3.6e-30 135.6 164 54.3
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.6e-30 135.6 177 49.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 4.7e-30 135.2 165 54.5
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 6.1e-30 134.8 176 49.4
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.0e-29 134.0 176 50.0
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.4e-29 133.7 178 49.4
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.8e-29 133.3 173 52.0
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.8e-29 133.3 173 52.0
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.8e-29 133.3 178 48.9
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 2.3e-29 132.9 171 52.6
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 3.9e-29 132.1 177 48.6
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 5.1e-29 131.7 166 50.0
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 5.1e-29 131.7 176 48.9
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 6.7e-29 131.3 164 51.2
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 1.5e-28 130.2 169 48.5
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.0e-28 129.8 177 48.0
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 3.3e-28 129.0 166 51.8
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.3e-28 129.0 166 51.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 4.4e-28 128.6 168 54.2
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.7e-28 128.3 177 52.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 5.7e-28 128.3 168 51.8
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 7.4e-28 127.9 182 47.3
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.7e-28 127.5 166 51.2
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 9.7e-28 127.5 174 48.3
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.7e-27 126.7 169 47.3
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.2e-27 126.3 167 50.3
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.3e-27 124.8 167 51.5
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 6.3e-27 124.8 193 45.1
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 6.3e-27 124.8 175 46.3
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.2e-27 124.4 167 50.3
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.1e-26 124.0 174 47.1
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.8e-26 123.2 171 48.5
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 3.1e-26 122.5 177 46.9
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 4.1e-26 122.1 167 52.7
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.9e-26 121.3 175 44.6
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.2e-25 120.6 171 45.0
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.2e-25 120.6 171 45.0
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.2e-25 120.6 174 49.4
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.0e-25 119.8 169 47.3
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.6e-25 119.4 170 47.1
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 4.5e-25 118.6 171 45.0
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 4.5e-25 118.6 172 43.6
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 4.5e-25 118.6 172 43.6
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.9e-25 118.2 167 47.3
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 5.9e-25 118.2 135 62.2
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 7.7e-25 117.9 217 41.9
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.3e-24 117.1 171 43.9
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.7e-24 116.7 173 46.8
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.7e-24 116.7 175 44.6
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.2e-24 116.3 172 43.6
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 2.9e-24 115.9 171 45.0
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 2.9e-24 115.9 171 45.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 2.9e-24 115.9 173 48.6
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.8e-24 115.5 171 43.3
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.8e-24 115.5 171 43.3
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.8e-24 115.5 164 46.3
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 6.5e-24 114.8 176 51.1
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 6.5e-24 114.8 175 49.7
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 1.1e-23 114.0 166 47.6
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.4e-23 113.6 137 48.2
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.4e-23 113.6 167 45.5
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.9e-23 113.2 173 44.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 2.5e-23 112.8 140 51.4
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 4.2e-23 112.1 172 42.4
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.6e-22 110.2 170 42.9
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 2.1e-22 109.8 171 43.9
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 3.6e-22 109.0 95 62.1
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 6.1e-22 108.2 175 42.3
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.0e-21 107.5 180 46.7
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 1.8e-21 106.7 161 46.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.3e-21 106.3 250 37.6
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 3.3e-20 102.4 146 50.0
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 4.4e-20 102.1 174 47.1
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 5.7e-20 101.7 170 46.5
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 2.8e-19 99.4 144 43.8
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 6.3e-19 98.2 81 64.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 6.3e-19 98.2 81 64.2
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.4e-18 97.1 142 47.2
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.4e-18 97.1 167 44.9
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 4.1e-18 95.5 92 62.0
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 9.1e-18 94.4 91 59.3
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 8.5e-16 87.8 150 46.7
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.1e-15 87.4 129 46.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 5.5e-15 85.1 67 67.2
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 3.6e-14 82.4 63 69.8
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.0e-13 80.9 55 76.4
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.4e-13 80.5 131 48.1
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 4.0e-13 79.0 184 41.3
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 6.3e-11 71.6 147 38.1
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 8.2e-11 71.2 141 43.3
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 2.4e-10 69.7 186 33.9
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 3.1e-10 69.3 67 58.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 1.7e-08 63.5 66 53.0
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 2.2e-08 63.2 61 60.7
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.1e-07 60.8 67 50.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 3.2e-07 59.3 76 46.1


User provided reference genes

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