Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022571.2 Cucumis melo HOM05D016993 ORTHO05D019020 2.2e-137 492.3 242 100.0
MELO3C027637.2 Cucumis melo HOM05D016993 ORTHO05D019020 1.7e-36 157.1 83 95.2
MELO3C025402.2 Cucumis melo HOM05D016993 ORTHO05D019020 9.7e-29 131.3 93 73.1
MELO3C029988.2 Cucumis melo HOM05D007013 ORTHO05D029173 1.6e-26 124.0 65 95.4
MELO3C025440.2 Cucumis melo HOM05D016993 ORTHO05D019020 2.0e-26 123.6 71 88.7
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 3.0e-22 109.8 58 94.8
MELO3C029511.2 Cucumis melo HOM05D007013 ORTHO05D029173 2.6e-21 106.7 56 96.4
MELO3C025412.2 Cucumis melo HOM05D007013 ORTHO05D029173 3.4e-21 106.3 57 93.0
MELO3C029866.2 Cucumis melo HOM05D007013 ORTHO05D029173 1.7e-20 104.0 57 91.2
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 3.1e-19 99.8 58 86.2
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 5.4e-19 99.0 58 87.9
MELO3C033662.2 Cucumis melo HOM05D016993 ORTHO05D019020 1.6e-18 97.4 55 90.9
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 4.0e-14 82.8 58 72.4
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 6.3e-12 75.5 58 63.8
CsaV3_3G005300 Cucumis sativus L. HOM05D016993 ORTHO05D019020 3.1e-11 73.2 47 76.6
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.6e-10 70.9 58 55.2
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 1.3e-09 67.8 58 63.8
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 6.6e-09 65.5 58 56.9
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 1.1e-08 64.7 58 56.9
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 3.3e-08 63.2 58 58.6
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 3.3e-08 63.2 63 55.6
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 5.6e-08 62.4 58 55.2
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 5.6e-08 62.4 58 55.2
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 5.6e-08 62.4 58 51.7
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 7.3e-08 62.0 58 55.2
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 9.5e-08 61.6 58 55.2
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 9.5e-08 61.6 58 56.9
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 1.2e-07 61.2 58 53.4
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.6e-07 60.8 58 51.7
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 2.1e-07 60.5 66 48.5
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.1e-07 60.5 58 50.0
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 2.8e-07 60.1 60 56.7
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 2.8e-07 60.1 58 51.7
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 3.6e-07 59.7 58 51.7
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 3.6e-07 59.7 58 51.7
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 6.1e-07 58.9 58 53.4
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.4e-06 57.8 58 51.7
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.4e-06 57.8 62 51.6
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 1.8e-06 57.4 58 50.0
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 2.3e-06 57.0 58 50.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 4.0e-06 56.2 58 53.4
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 5.2e-06 55.8 58 50.0
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 6.8e-06 55.5 58 50.0
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.8e-06 55.5 58 50.0


User provided reference genes

Program Settings