Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 0.0e+00 1190.3 651 100.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 0.0e+00 1099.0 651 93.5
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 2.2e-301 1038.5 653 89.1
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 5.8e-254 880.9 642 78.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 2.1e-219 766.1 651 64.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 6.1e-219 764.6 655 67.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 4.1e-215 751.9 655 66.6
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.9e-212 743.0 655 62.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 7.2e-212 741.1 656 62.2
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 3.6e-211 738.8 653 62.0
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 8.8e-210 734.2 653 64.8
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.5e-209 733.4 653 64.6
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 8.3e-208 727.6 652 62.4
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 9.1e-207 724.2 656 61.0
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 4.5e-206 721.8 659 59.6
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 7.2e-204 714.5 655 60.5
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 3.0e-202 709.1 656 60.4
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.2e-202 708.4 657 60.3
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 5.2e-202 708.4 652 59.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 6.8e-202 708.0 667 62.2
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.5e-201 706.8 653 62.5
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.6e-201 706.1 675 60.1
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.4e-201 705.7 661 60.1
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.4e-201 705.7 659 59.5
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 7.5e-201 704.5 660 62.1
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.3e-200 703.7 664 63.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.7e-200 703.4 655 63.8
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.8e-200 702.6 651 60.7
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.3e-200 701.4 657 59.4
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.1e-199 700.7 654 59.8
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.8e-199 699.9 665 58.5
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 5.4e-199 698.4 671 59.0
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 9.2e-199 697.6 649 61.2
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.6e-198 696.8 658 60.3
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 2.0e-198 696.4 648 60.6
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.0e-197 694.1 673 58.2
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 2.3e-197 693.0 648 60.6
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.5e-196 690.3 674 57.6
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.9e-196 689.9 649 60.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 4.3e-196 688.7 657 58.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.6e-196 688.3 679 58.9
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.2e-195 687.2 676 57.1
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.0e-194 684.1 658 57.8
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 1.4e-194 683.7 657 61.5
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 1.4e-194 683.7 675 57.2
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 1.5e-193 680.2 668 57.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.6e-193 679.5 666 58.4
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 3.4e-193 679.1 660 58.9
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 9.8e-193 677.6 676 58.1
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.7e-192 676.8 661 57.9
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.2e-192 676.4 647 59.0
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 4.9e-192 675.2 666 58.3
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.8e-191 673.3 675 56.9
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 9.2e-191 671.0 662 57.7
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 9.2e-191 671.0 662 57.7
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.0e-190 669.8 658 57.4
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 2.7e-190 669.5 679 56.8
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 7.8e-190 667.9 655 58.8
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 8.6e-189 664.5 654 56.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 3.3e-188 662.5 633 59.9
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 7.3e-188 661.4 639 59.5
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 2.8e-187 659.4 672 55.8
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 6.8e-186 654.8 677 56.0
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 1.5e-185 653.7 675 55.6
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 1.5e-185 653.7 637 58.4
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.6e-185 652.9 653 57.1
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 3.7e-184 649.0 665 55.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.1e-183 647.5 650 60.2
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.9e-183 646.7 663 54.8
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 3.5e-182 642.5 643 57.5
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.0e-181 641.0 675 55.9
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 2.5e-180 636.3 664 55.4
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.3e-180 635.6 622 59.5
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.2e-178 628.6 662 56.0
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.2e-177 627.5 679 53.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 3.4e-177 625.9 677 56.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 9.9e-177 624.4 655 58.9
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.3e-176 624.0 584 62.8
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 1.2e-174 617.5 656 54.7
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.9e-172 610.1 671 52.3
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 5.4e-167 592.0 673 51.7
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 9.2e-167 591.3 601 56.1
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 4.3e-164 582.4 671 53.9
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.1e-163 580.1 664 51.5
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.4e-162 577.4 664 51.7
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 5.8e-161 572.0 659 51.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 2.1e-158 563.5 677 49.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 4.3e-156 555.8 685 48.6
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 9.6e-156 554.7 675 48.7
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.3e-155 554.3 687 48.9
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.8e-155 552.4 679 48.7
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 6.2e-155 552.0 672 48.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 6.2e-155 552.0 679 48.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 1.2e-153 547.7 630 51.1
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 1.7e-152 543.9 672 47.8
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 3.2e-151 539.7 678 47.9
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 5.4e-151 538.9 681 48.6
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 3.5e-150 536.2 677 47.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.1e-146 523.1 477 60.4
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.6e-126 456.4 695 43.5
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 7.7e-121 438.7 678 41.2
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.0e-116 424.1 658 43.5
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.8e-115 420.2 632 43.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.8e-112 409.8 696 37.2
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 4.4e-108 396.4 563 42.8
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.4e-106 391.3 380 63.4
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.4e-106 391.3 647 38.9
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.2e-97 361.7 308 66.2
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.0e-85 322.0 337 55.2
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 3.7e-83 313.5 311 57.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 6.3e-83 312.8 331 52.9
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.4e-74 284.3 244 62.3
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 6.4e-67 259.6 609 32.7
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.2e-51 208.0 245 48.2
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.1e-45 187.6 250 43.2
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 3.4e-44 184.1 325 38.5
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 4.2e-42 177.2 264 42.4
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 4.5e-28 130.6 358 29.6
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 6.0e-17 93.6 182 31.9
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.8e-11 74.3 87 50.6
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 6.7e-08 63.5 175 28.6


User provided reference genes

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